| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3440 |
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| Symbol | |
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| ID | 4597256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3646044 |
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| End bp | 3648302 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639778046 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_924627 |
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| Protein GI | 119717662 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAA ACGGTTTCGT TCCATCGAAC AGCGTAGGTC GGCGCGGCAT TCCCTCCAAC
TCGACTTCTT CCGCGATCGC TTCCGCAGGC GGGGCGGTGG TCTGGACCGG AGCGGGCGCG
GGCCGGGTGC GAGCACGGCC TGAGCAGGTG TCGGTCGGCC CCGGCACAAT GTCCTGCGTG
ACCGACCCGC GCGAGGAGCA CCGCCTGATC GCCGAGGAGA TCGAGGAGGC CCGGTGGCGC
TACTACGTCC TGGACAGCCC GACCATCGAC GACGCCGACT TCGACCGGCG GATGCGGCGC
CTGGAGGCGC TCGAGGAGGA GTTCCCCGAG CTGCGCACCC CCGACTCGCC GACCCAGACG
GTCGGCGGGG CGGTGTCGAC CGACTTCACC TCCCACCCCC ACCTGCGCCG GATGGAGAGC
CTGGACAACG CCTTCTCGGT CGAGGAGGTC GAGGCGTGGT ACGCCCGCCT GCGCCGGGAC
GGCGTCGAGG ACCCGGCGCT GCTGTGTGAG CTCAAGGTCG ACGGCCTGGC GATCAACCTG
CTCTACGAGG AGGGCCGCCT GGTGCGGGCG CTGACCCGCG GTGACGGCAC CACCGGTGAG
GACGTCACCT CGAACGTCAA GACGATCACC TCGGTCCCGC ACCGCCTCAC CGGCACCGAC
GAGTTCCCGG TGCCCGCGCT GGTCGAGGTG CGCGGCGAGG TGTTCTTGCC CGTCGAGGCG
TTCGAACGGC TCAACGAGTC GCTGCTCGAG GCCGGCAAGG CGCCGTTCGC CAACCCCCGC
AACTCCGCTG CCGGCTCGCT GCGCCAGAAG GACCCCCGGA TCACGGCGTC CCGGGCGCTG
GGGATGGTCT GCCACGGCAT CGGCGAGCGC CGCGGCTTCG AGCCCCAGGC CCAGTCCCAC
GCCTACGACG CACTGGCCGC CTGGGGGCTG CCCACCAGCG ACCAGGTGCG GGTGGTGTCG
ACCCTGAAGG GCGTCGAGGG CTACATCGAG AACGCCGGCG CCAGGCGGCA CACGATCGTG
CCGTACGAGA TCGACGGCGT CGTCGTGAAG GTCGACGACG TGGCGCTCCA GCGCCGCCTC
GGCTCGACCA GCCGGGCCCC GCGCTGGGCG ATCGCGTTCA AGTACCCGCC CGAGGAGGTC
AACGCCAAGC TCCTCGAGAT CCGGGTGAAC GTCGGGCGCA CGGGCCGGGT CACGCCGTAC
GCCGTGATGG AGCCGACCAA GGTCGCCGGC TCGACCGTGG AGAACGCGAC GCTGCACAAC
TTCTACGAGG TCGAGCGCAA GGACGTCCGG CCCGGCGGCC CCGGTGACCC CGGTGACACG
GTGATCCTGC GCAAGGCCGG GGACGTGATC CCCGAGATCC TCGGCCCGGT CCTGGCGCTG
CGGCCCGAGG GGCTGCAGCC GTGGGTGCCG CCGACGACCT GCCCGTCCTG CGGCACGCCC
CTGGTGGAGC AGAAGGAGGG CGACAAGGAC CGGCGCTGCC CCAACCACGA GAAGTGCCCG
GGCCAGCTGC GTGAGCGGGT CTTCTTCGTC GCCAGCCGCA ACGCGTTCGA CATCGAGGGG
CTCGGCTACG AGGCCGCGGT CGCGCTGCTC GACGCCGAGG TGATCGCCAA CGAGGGCGAC
GTGTTCGACC TGGACGCGGC CGCGCTGCTC CGCGCGCCGC TGTTCACCCG GGCGCCGAAG
AAGGACGAGG ACGGACCCCA GCTGAGTGCG AACGGCCAGC GGCTGCTCGA CAACCTCGAC
AAGGCGAAGC AGGTGCCGCT GTGGCGGGTA CTGGTCGCGC TGTCGATCCG GCACGTCGGG
CCGAAGGCCG GGCGGGCGCT GGCGACGGAG TTCGGCTCCA TGGCGGCGAT CCGGGCCGCG
ACGGAGGAGC AGCTGGCCGC GGCCGAGGGC GTCGGCCCGA CCATCGCCGA GGCCGTGATC
GAGTGGTTCA AGGAGCCGTG GCACGTCGAG ATCGTCGACA AGTGGGAGCG CGCCGGCGTC
ACCATGGCGG ACGAGCGCGA CGAGTCCACG CCGCGGACGT TGGCGGGGCT GACCGTCGTG
GTCACCGGCT CCCTGGTCGA CTTCAGCCGT GACTCGGCCA AGGAGGCGAT CCTCTCGCGC
GGTGGCAAGG CCGCGGGCTC GGTGTCGAAG AAGACCGACT ACGTCGTGGT GGGGGAGAAC
GCCGGGTCCA AGGCCGACAA GGCCGAGCAG CTCGGCGTCC CCGTCCTCGA CGAGGCCGGC
TTCAAGACGC TGCTGGACGG CGGACCCGCG GCCCTGTGA
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| Protein sequence | MKRNGFVPSN SVGRRGIPSN STSSAIASAG GAVVWTGAGA GRVRARPEQV SVGPGTMSCV
TDPREEHRLI AEEIEEARWR YYVLDSPTID DADFDRRMRR LEALEEEFPE LRTPDSPTQT
VGGAVSTDFT SHPHLRRMES LDNAFSVEEV EAWYARLRRD GVEDPALLCE LKVDGLAINL
LYEEGRLVRA LTRGDGTTGE DVTSNVKTIT SVPHRLTGTD EFPVPALVEV RGEVFLPVEA
FERLNESLLE AGKAPFANPR NSAAGSLRQK DPRITASRAL GMVCHGIGER RGFEPQAQSH
AYDALAAWGL PTSDQVRVVS TLKGVEGYIE NAGARRHTIV PYEIDGVVVK VDDVALQRRL
GSTSRAPRWA IAFKYPPEEV NAKLLEIRVN VGRTGRVTPY AVMEPTKVAG STVENATLHN
FYEVERKDVR PGGPGDPGDT VILRKAGDVI PEILGPVLAL RPEGLQPWVP PTTCPSCGTP
LVEQKEGDKD RRCPNHEKCP GQLRERVFFV ASRNAFDIEG LGYEAAVALL DAEVIANEGD
VFDLDAAALL RAPLFTRAPK KDEDGPQLSA NGQRLLDNLD KAKQVPLWRV LVALSIRHVG
PKAGRALATE FGSMAAIRAA TEEQLAAAEG VGPTIAEAVI EWFKEPWHVE IVDKWERAGV
TMADERDEST PRTLAGLTVV VTGSLVDFSR DSAKEAILSR GGKAAGSVSK KTDYVVVGEN
AGSKADKAEQ LGVPVLDEAG FKTLLDGGPA AL
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