| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3429 |
|---|
| Symbol | |
|---|
| ID | 4597245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3632851 |
|---|
| End bp | 3633672 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639778035 |
|---|
| Product | integral membrane protein |
|---|
| Protein accession | YP_924616 |
|---|
| Protein GI | 119717651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.181769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGGC GTGCGGGCGC GCCCGCGGTC CGGATCGCGC CGCGCTCGGG CGCCGTGCTC
GCGGTCGCCT CGGCGGCCGG GCTGATGATG CTCTGTTGGC CGCTGCTGCT GAGGGTCCCC
GAGGGGGCGC GCGTCGATCC GCCGTTCGTG TTCGTCGCGC TGCTCCCGGT GGTGCTCGCG
GTGGTGCTGG CCGAGCTCAA CGAGGGCGGG CTGGACCCGC GGGTGCTCGC GGTGCTCGGC
GTGCTCAGCG CCGTCAACGC CATCCTCCGC GGGATCTCGC CGGGCACGGC CGGCGTCGAG
CTGACGTTCT TCCTGCTGAT CCTGGCCGGG CGGGTGTTCG GCGCCGGCTT CGGGTTCGTC
CTCGGCTGCA CGTCGCTGTT CGCGTCGGCG CTCATGACCG CCGGGGTCGG ACCCTGGCTG
CCCTACCAGA TGCTGTGCGC CGCCTGGGTC GGGATGGGGG CCGGGCTGCT CCCGCGGCGG
GTCACCGGAC GGGCCGAGAT CGCGATGCTG GCGGCGTACG GCGTGGCCGC GGCGTACCTG
TTCGGGCTGT TCATGAACCT GTCGGGCTGG CCGTTCCTGA CCGGCATCGA GGTCGCGGGG
CATGCCGGGT CGCTGTCTTA CGTGGCCGGT GCGCCGGTCC TGGACAACCT GCACCGCTTC
CTCGTCTACA CGCTGCTGAC CTCCACGGGC AGCTGGGACA CGGTCCGGGC CGTCACCAAC
GCGGTCGCGA TCGTCGTGCT CGGCCCCGCG GTGCTCACCA CGCTGCGCCG GGCGGCGCGC
CGGGCGACCG TGACCGGCTC GGTGACCGTC ACGGCTCGAT GA
|
|---|
| Protein sequence | MTGRAGAPAV RIAPRSGAVL AVASAAGLMM LCWPLLLRVP EGARVDPPFV FVALLPVVLA
VVLAELNEGG LDPRVLAVLG VLSAVNAILR GISPGTAGVE LTFFLLILAG RVFGAGFGFV
LGCTSLFASA LMTAGVGPWL PYQMLCAAWV GMGAGLLPRR VTGRAEIAML AAYGVAAAYL
FGLFMNLSGW PFLTGIEVAG HAGSLSYVAG APVLDNLHRF LVYTLLTSTG SWDTVRAVTN
AVAIVVLGPA VLTTLRRAAR RATVTGSVTV TAR
|
|---|
| |