Gene Noca_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3356 
Symbol 
ID4598754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp3556711 
End bp3557367 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content75% 
IMG OID639777964 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_924545 
Protein GI119717580 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.933468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGAC CGGTGATCGT GGTGGTGGGT GCAGGCCCGG GCGTGAGTGG GTCGGTGGCG 
CGCGCGTTCG CCCGGGACGG GTACGACGCC GGCCTCCTCG GCATCGACGA GGAGCAGCTG 
CAGCGGCTCG CCGACGAGCT CGAGGAGCTC GGCGCCACCG TCGGCCACGC GGTCGTCGAC 
ATCACCGACG CCGAGGCCGC CGGCGCCGCG ATCCGGCGGA TCGGCGAGCA CACGGGGCGG 
ATCGACGTGC TGCACTTCAA CCCCAGCGCG TTCCGGGAGA AGGACCCGCT GGAGCTGACC 
GTCCCCGAGC TGCTCGAGGA CGTCACGCTC GGGGTCGGCG CGCTCCTGGT CGCGGTCCAG 
GCGGCCCGAC CGTTCCTGTC CGCCGGCGGC CGCGTCACCG CCACCGGCAG CATGGCCGCC 
GACAAGCCGT GGCACCGGGC CGCCTCGCTC GGCGTGCAGA AGGCCGGCCT GCGCAACCTC 
GTGCACAGCC TCGACGCCAC CCTGGCACCC GACGGCATCC GCGCGGTCTC GGTCACGGTG 
CGCGGCACGC TGGCGAAGGA GGGCCCGTTC ACGCCCGACC GGGTCGCCGA GGCGATCCTC 
GCCGCCGCCC GCCAGGACGA GGACGGGTGG CGCTCCGAGA TCCCCTACTC CGGGTGA
 
Protein sequence
MSRPVIVVVG AGPGVSGSVA RAFARDGYDA GLLGIDEEQL QRLADELEEL GATVGHAVVD 
ITDAEAAGAA IRRIGEHTGR IDVLHFNPSA FREKDPLELT VPELLEDVTL GVGALLVAVQ 
AARPFLSAGG RVTATGSMAA DKPWHRAASL GVQKAGLRNL VHSLDATLAP DGIRAVSVTV 
RGTLAKEGPF TPDRVAEAIL AAARQDEDGW RSEIPYSG