Gene Noca_3354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3354 
Symbol 
ID4598752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp3554875 
End bp3555534 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content73% 
IMG OID639777962 
ProductGTP cyclohydrolase 
Protein accessionYP_924543 
Protein GI119717578 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCAGC TGGTGACCCA GCCGTTGAAC CAGCCGTTGA GCCACGCCGC CAGCGAGGCC 
CGGGCCCGCT GGCGGCCGCG GGTCTCGCAG CCCGCGGCCG AGGTCGACCT GGTCGCGGCC 
GAGAGTGCCG CCAGCGACCT GCTGCGCGCC CTCGGCCTGG ACATCGAGAC CGACGAGATG 
GTCGAGACCC CGCGCCGGCT GGTGGCGGCG TACCACGAGC TGCTCACCGG CCCCGACGTC 
GACCTGACGA CCTTCCCCAA CACCGAGGGC TACGATGAAT TGGTGCTGGT GGCCAACATC 
CCCGTGCGCT CGGTGTGCGA ACACCACATG CTGCCCTTCG TGGGTGTCGC CCACGTCGGC 
TACCTGCCCG ACGAGCGGAT CCTGGGACTC TCGAAGTTCG CTCGACTCGT CGAGCTCGTC 
GCCCGCCGTC CGCAGACCCA GGAGCGGCTG ACCACCGAGG TCGCCGATCA CCTGACCACG 
CACCTCCAGC CGCGTGGCGT CGGCGTCGTC ATCGAGGCCG AGCACACCTG CATGAGCCTG 
CGCGGCGTGC GCGCCCAGGG CACCCGCACG GTCACCTCCG CGCTGCGCGG GACCCTGCGG 
GACCACGCCG CCCGCGCCGA GTTCCTGTCG CTGGCCCGCG AGCAGGGGGC CCGGCCGTGA
 
Protein sequence
MSQLVTQPLN QPLSHAASEA RARWRPRVSQ PAAEVDLVAA ESAASDLLRA LGLDIETDEM 
VETPRRLVAA YHELLTGPDV DLTTFPNTEG YDELVLVANI PVRSVCEHHM LPFVGVAHVG 
YLPDERILGL SKFARLVELV ARRPQTQERL TTEVADHLTT HLQPRGVGVV IEAEHTCMSL 
RGVRAQGTRT VTSALRGTLR DHAARAEFLS LAREQGARP