Gene Noca_3348 details

Gene Information

• Locus tag: Noca_3348
• ID: 4598746
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 3550987
• End bp: 3551544
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 639777956
• Product: TetR family transcriptional regulator
• Protein accession: YP_924537
• Protein GI: 119717572

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTACC ACCGCGCGGA CGTCGTCGAC CGGGCGGTCG GGGTCCTGGA CGCCTACGGG 
CTCGCGGACC TGACCATGCG GCGGCTCGGC GCGGAGCTCG GCGTGCAGCC GAGCGCGCTC 
TACCACCACT TCGCGAACAA GCAGACCCTG CTGGCCGCGG TCGCCGACGA GGTGCTGGCG 
CGCGGGCCGA GCGGGCCCCG GCCGGACGCA TGGGACGACC GGGTCGCCGC GGTCTGCGGC 
GAGCTGCGCG ACGCGATGCT GGCCTACCGC GACGGCGCCG AGCTGGTGGC CACGGCGTAC 
TCCTTCGGGC TGGGCGCGGC GGCGCCGTAC GACGAGCTGG TCGTGGCCCT TCGCGAGGGT 
GGGCTGGACC CGGTGCTGGT GCCGACGGCC GCGCGCACGC TGCTGCACTT CGTCTTCGGC 
CACGCGACCG ACGAGCAGAC CCACCTGCAG GCCGGGTCCG CGGGCGCCAT CGACGACCAG 
CCGCGCGAGA CCTCCGACTT CGCGCTCGGG CTCGGGCTCG TGCTGGACGG GATCAGGTTG 
CGCCAGCGCG TGGGCTGA 

 

Protein sequence

MRYHRADVVD RAVGVLDAYG LADLTMRRLG AELGVQPSAL YHHFANKQTL LAAVADEVLA 
RGPSGPRPDA WDDRVAAVCG ELRDAMLAYR DGAELVATAY SFGLGAAAPY DELVVALREG 
GLDPVLVPTA ARTLLHFVFG HATDEQTHLQ AGSAGAIDDQ PRETSDFALG LGLVLDGIRL 
RQRVG