| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3310 |
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| Symbol | |
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| ID | 4600202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3516608 |
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| End bp | 3518146 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639777916 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_924499 |
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| Protein GI | 119717534 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCTGG CGGAGCTGTT GGCCGCGTAC TCGCTGGCGA CCGACCTCGG CCTCGGCCAG
CCGATGGAGC ACCTGCTCCG ATCGTGGCGG ATCGCCGCCC GACTCGGCAC CCACGTCGGA
CTCCCCGATG GCGAGCAGGC GGCCCTGTTC TACGTCGCGA TGCTCTCGTG GGTGGGCTGC
GTCGCGGACG CACCGGAGGT CGCGGCCACC TTCGGGGACG ACATCTCCTT CCGCTCCGAC
AGCTACGACG TCGACCTCGG GGGAATGGCG GCGTACCGCT TCTTCCTGGG CCACGCGGGG
GCCGGCGCCT CGGCGACGGC GCGCGCGAGG GTGGTCGCCA CGCTCCTGGC CACCGGCGGT
CGCCGCGTCA TGCGCGGCAT CCAGGCCCAC TGCCTGATCA CGTCCACACT GGCCGAGCGG
CTCGGTCTCG ACGACGCCGT GTCGGCGGCG GTGCGGCAGT TCTTCGCGCG CTGGGACGGC
CAGGGCGTCC CGCCGCACGT CGGCGGGGAG GACCTGTCGC CCTGGGTCCG GCTCTTCCAC
GTCGGCGACA TCACCGAGGT GTACCACCGC AACGGCGGCG TGGAGGCCGC GGTCCGGGTC
GCGCGGGAGC GCCGAGGACG GCAGTTCGAC CCGGCTCTCG CCGACGCCTT CTGCGAGATC
GCACCAGAAG TCCTGCCTGC TCTCGGCGAG GACGACGACC TCCGTGGCAT GCTCGCCGAC
GAGCCCGCCC TGCGGCGCTG CCTGTCCGGG CCCGAGCTCG ACGAGGCGCT GGCAGCGCTC
GCCGACTTCA CCGACCTGCG CTCACCGAAC CGCGCCGGCC ACTCCAGTGG CGTCGCCGAG
CTCGCCGGGT CGGCCGCGTC GTGCCTCGGC CTTCCGGCCG TGGACGTGGC CGCGTCGCGA
CGAGCCGGGT ACCTGCACGA CATCGGGCTC CACGGTGTCC CGTCGACGAT CCTGGACAAG
CCGGGTGCCC TGTCCGCGAC GGAGTGGGAA CGGGTCCGGG TCAGCTCGTA CTACACCGAG
CGGGTGCTGG CGCAGCCGGC GCCACTCGCC AGGATCGGCG CGATCGCGTC GTACACGAAC
GAGCGGATGG ACGGCAGCGG CTACCACCGG GGCGCGAGCG GGGCGTCGAT CCCGATGGCG
GGCCGGGTCC TGGCGGCGGC CTGCGCCTTG CGCACGCTGA CCGAACCCCG GGTCGGGCGG
CCGCCGAAGT CGGTGAAGGA CGCTGCAACG GAGCTCCGCA GCGAGGTGCG CGCCGGCCGT
CTGGACGTCG ACGCCACCGA TGCGGTCCTC TCCGCCGCAG GAGCAGGCGG CCGACGCAGG
GTCGCCGGAC CCGCCGGGCT GACCCAGCGC GAGGTCGAGG TCCTGGTCCT GATCGCGCGC
GGCGTGGCGA CCAACGAGGT CGCGGCGCGC CTCGGGGTGT CCCGCAAGAC CGCGGCCACG
CACATCGAGC GGATCTACGC CAAGACCGGC GCGTGCTCGC GCTCGACGGC GACCTTGTTC
GCCCTGCGCA ACGGCCTCCT CGACCCGCTC GCGACCTGA
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| Protein sequence | MTLAELLAAY SLATDLGLGQ PMEHLLRSWR IAARLGTHVG LPDGEQAALF YVAMLSWVGC
VADAPEVAAT FGDDISFRSD SYDVDLGGMA AYRFFLGHAG AGASATARAR VVATLLATGG
RRVMRGIQAH CLITSTLAER LGLDDAVSAA VRQFFARWDG QGVPPHVGGE DLSPWVRLFH
VGDITEVYHR NGGVEAAVRV ARERRGRQFD PALADAFCEI APEVLPALGE DDDLRGMLAD
EPALRRCLSG PELDEALAAL ADFTDLRSPN RAGHSSGVAE LAGSAASCLG LPAVDVAASR
RAGYLHDIGL HGVPSTILDK PGALSATEWE RVRVSSYYTE RVLAQPAPLA RIGAIASYTN
ERMDGSGYHR GASGASIPMA GRVLAAACAL RTLTEPRVGR PPKSVKDAAT ELRSEVRAGR
LDVDATDAVL SAAGAGGRRR VAGPAGLTQR EVEVLVLIAR GVATNEVAAR LGVSRKTAAT
HIERIYAKTG ACSRSTATLF ALRNGLLDPL AT
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