| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3306 |
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| Symbol | |
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| ID | 4600198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3512158 |
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| End bp | 3513924 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777912 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_924495 |
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| Protein GI | 119717530 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.364565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGG GCCTGACCGG TGGTCAGCTG ATCGCCAAGA TGCTGGCGGC CGAGGCGGTC
GACCAGGTGT TCGGGATCAT CGACGGCACG TACTTCGGGC TCTACCGGGC GCTGGGCGAC
GAGGGCATCA CGCTGCACTC CCCGCGCCAC GAGGCGGCCG CGGCGCACAT GGCGGGCGCC
TACGCCCGGG TCAGCGGACG GCTCGGGGTC TGCATGGCCT CCAACGGCCC CGGCGTCGCG
AACGTGCTGC CCGGCGTCGC CGTCGAGCAG GGCGAGGGCA ACCGGATCCT GCTGATCACC
AGCGGCCGGC GGGTCGGCAT CACCCACCCC GACCGCGGCG GCACCTACCA GAACTTCGAC
CAGACCGCCG TGACGGCGCC GATGGCCAAG TGGTCCTGCC ACGTGCCGAG CGCCGACCGA
CTGCCCGAGA TCCTGCGGCG GGCGCTGCGG GTGAGCTTCA GCGGCCGGCC GGGCGTGGTG
CACGTCGACG TCCCCGAGAA CATCGTCAAC CAGCCGACCG GCCTCGACGC CGGGGCGGTG
CGGGCGCCGG AGTCCTACCG GCGTACGACG CCGCTGCAGC CCGACCCGGT CCTCGTCGAG
AAGGCCGCGC AGCTGCTCGT CGAGGCCGAG TGGCCGATGA TCCACGCCGG CTCCGGGGTC
TACCACGCCG GCGCGGAAGC CGAGCTCGCG CGGCTGGCCG GCCTGCTCGC CGCACCGGTG
ACCACCAGCT GGGCGGCCCG CGGCGCACTG TCGGAGGCCC GGCCCGAGGC CATCCCGATG
ACGGCACTGG GCGTCAACGA CGAGGTCCGC AACGCCGCCG ACGTGGCACT GGTCGTCGGC
AGCCGGCTGG GGGAGACCGA CTGGTGGGGC AAGGCGCCGA ACTGGGCGCC GCCGGCGCTG
CAGAGGACGA TCCAGGTCGA CGTCGACGAC GAGCGGCTGG GTGTCAACAA GCCGGTCAGC
CTGGCGATCC TGGCCGACGC CCGCGAGGCG CTCCGGGCCC TGGCCGACGC GGTGGAGCGG
CGGACGGTCC CGGGGCTGGC CGCGCGCCGG GACCGGCTCG AGGTGTGGCG CGGCAAGGTC
GCCGACGAGC GGGCGAAGCT CGCCAAGGCG GTCAAGCCCG GGAGCCCGGT CCACCCCGGT
CACGTGCCGT CGGTCGCGCA GCAGGTGATG CCCGACGACA CCGTGTGGGT CTTCGACGGC
GGCAACACGG TCGTGTGGTC GAACTTCCAC CACTCGGCCG ACGTGCCGCG GACCATCCTG
TCGACGTACA AGTTCGGCAT GCTCGGCGCC GGCATGGGCC AGGCCCTCGG CGCCGCGGTC
GCGGCGCCCG ACCAGCGGGT CTGCGTGCTC ATCGGCGACG GTGCGTTCGG CATGCACCCG
ACCGAGGTCG AGAGCGCGGT GCGCCTCGGG CTGCCCATCG TCTACGTGGT CCTGGTCGAC
GGCGCGTGGG GCATGGTCAA GATGAGCCAG CAGATCCAGG CCCGCCCGAT CGCGACGGTG
GCGCACAAGA TGCTGACCAA CACCACGCTG CCGGCGGACC AGATCGTGTA CGCCGACTTC
GCGCCCTGCC GCTACGACCT GATGGGCGAG GCGATGGGAG CCCACGGCGA GCTGGTGACC
GACTCGGCCG ACCTGCCGGC CGCGCTGGAG CGGGCCCGCG ACTGCGGCCG CGCCGCCGTG
GTGCAGGTGC ACGTCGACCA GGTCGAGCAC CTCTGGGCGC CGGGCCTGCA AGCGTTCAAG
AAGATGCACC AGGAGCCGAA GGGCTGA
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| Protein sequence | MAKGLTGGQL IAKMLAAEAV DQVFGIIDGT YFGLYRALGD EGITLHSPRH EAAAAHMAGA
YARVSGRLGV CMASNGPGVA NVLPGVAVEQ GEGNRILLIT SGRRVGITHP DRGGTYQNFD
QTAVTAPMAK WSCHVPSADR LPEILRRALR VSFSGRPGVV HVDVPENIVN QPTGLDAGAV
RAPESYRRTT PLQPDPVLVE KAAQLLVEAE WPMIHAGSGV YHAGAEAELA RLAGLLAAPV
TTSWAARGAL SEARPEAIPM TALGVNDEVR NAADVALVVG SRLGETDWWG KAPNWAPPAL
QRTIQVDVDD ERLGVNKPVS LAILADAREA LRALADAVER RTVPGLAARR DRLEVWRGKV
ADERAKLAKA VKPGSPVHPG HVPSVAQQVM PDDTVWVFDG GNTVVWSNFH HSADVPRTIL
STYKFGMLGA GMGQALGAAV AAPDQRVCVL IGDGAFGMHP TEVESAVRLG LPIVYVVLVD
GAWGMVKMSQ QIQARPIATV AHKMLTNTTL PADQIVYADF APCRYDLMGE AMGAHGELVT
DSADLPAALE RARDCGRAAV VQVHVDQVEH LWAPGLQAFK KMHQEPKG
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