Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3251 |
Symbol | |
ID | 4599189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3454083 |
End bp | 3454583 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777857 |
Product | TadE family protein |
Protein accession | YP_924440 |
Protein GI | 119717475 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGTG GGGAGGCACG GCGACGCCGT GTGCGCGCCG GCGGGCGTGA GCGTGGCGCC GCCGCGGTCG AGTTCGCGCT GGTCGCCCCG ATCCTGCTGC TGCTGGTCTT CGGCATCATC AGCTACGGCT ACATGCTCAG CTTCCGCCAG GCGCTGAGCC AGGGCGCCGC CGAGGGAGCG CGGGCGGCGG CAGTGTCGGC GCTGCCGGCC GCCGCGGACA AGCAGCAGGC CGCGCTCGAC GCCGTCAACG AGGCGCTCGA CTCCTACGGC GTCACGTGCC AGGGCACCGC AGCGGGCTCC AGCCTGCTGA AGGGGACCAC CGCCGTCGGC TCCTGCTCGG TCCTCACGGC AGCGTGCGCC AACGACGGCA CCAAGGAGTG CGTGACGGCG TCGCTGGACT ACGAGTACGC CGACCACCCG CTGCTGCCCA GCGTCCCCGG GCTCGGCGCC GTGCTGCCCG ACCACCTGCG GTACGACGCG GTGGCCCAGG TCAGCGGATG A
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Protein sequence | MAGGEARRRR VRAGGRERGA AAVEFALVAP ILLLLVFGII SYGYMLSFRQ ALSQGAAEGA RAAAVSALPA AADKQQAALD AVNEALDSYG VTCQGTAAGS SLLKGTTAVG SCSVLTAACA NDGTKECVTA SLDYEYADHP LLPSVPGLGA VLPDHLRYDA VAQVSG
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