| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3250 |
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| Symbol | |
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| ID | 4599188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3452365 |
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| End bp | 3454086 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777856 |
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| Product | membrane protein-like |
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| Protein accession | YP_924439 |
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| Protein GI | 119717474 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4655] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCGCC AGCGCGACGA GCGGGGGGCC GTTGTCCCGT TCGTCGCGGT GACGCTCACG
CTGCTGATCG CAATGGCCGC GTTCGCCGTC GACCTGGGAA TGCAGCGCGT CGTGCGCCGG
GACATGCAGG CCCTCGCCGA CGTCGTCGCC CTCGACCTCT CCCGACTCGT CAACGGCCGC
ACCGCGGCCC AGATCGAGGC CGGCTACAAC GGCTTCCCGA CCATCTCCAC CGAGCTGGGC
CGCAGCGTGG CCCGCAACAG GGACACCCTC GGGGACGCGC CCGTGGTGAC CTACAAGCTC
GTCCACCTCG ACGCCGCGAC CGGCCTGCTG GAGACCTCCG GCGGCGCCGT GAAGGCCTAC
AGCGGAACCG AGGTGCCGAA CGCCGTGTGG GTCCAGGCCG AGGGCTCGGT CGACTTCGCG
TTCGCGACCG GATCGGGTGG CGCCGTGCGG ACCGCGGTGG CCCAGCCGAG CCCGTCGGCC
TGCTTCCGCC TCGGCTCCTA CGCGGCCGGG GTCAGCACGG AGGACGCGAC CCTGCTCAAC
ACGCTCCTCA CTGGGCTGCT CGGCACGTCC GTCAACCTCA GCCTGGCGTC GTACCAGGCT
CTCGCCGGCG CCGGCGTGAG CGTCATGGAC CTCGTCGGTG TCGACTCCCT GGCTGTCGGG
TCGTTCGACG AGCTGATGGC GCTGGACGGG CTGACGGTCG CCAACGTGCT CAGCGCGAGC
GCGACCGCGC TGCAGAACAA CGGCGGCGAC GCGGTCGCCG TGTCGGCGCT GCAGGCCATC
GCCGTCGACG CCATCGGACC GACGACGATC GGGTTCGCCG ACCTGCTGAG CATCGCGACC
GGAGACTCCG CCGCCCTCGG TGCGTCGCTC AACGTGCTCG ACGTCGTCAC CGCCGCCGCG
TTCGCGGCCA ACGGCAGCCA CGTGCTGACC ATGCCCGGGC TCGGCCTGCT GTTGCCCAGC
CTGGGCACGG TCTCGAGCAG CACGTTGGAC GTCGGGAACC AGCCGACGCT CGCGTGCGGC
GCCGAGGGCG TCGCCGAGGC GCGCAGCGGT CAGGCGTCGA CGGCCGTGAG CGGGACCCTC
GCGGACATCT CGGTCGACCT CCTGCTCACC CAGTTCGCCG CCCGCACCAC GATCACCACC
GGCCTGGTCC TGGCCAGCGC CGAGGGCCTT CTCACCGACA TCACCTGCGG CGACGCGACC
GCGCTCACCA ACGCCGAGGG CATCGACGTC CAGGTCAGCT CCGCGCTCGC CTCGAGCGTG
TCGCTCACCG CCAGCATCCG GGTGACCGCC ACCGTGGACG TCGGGCTGGC GACGGTGACG
GTCGACGTGA CCACCCCGAC GACGACCTCG AGCGGACCGA GCACCACTCC GGCGACGACC
GTCCAGTTCC GGCACCCGCC GGACGACTAC GACACTGCCA AGACCTTCGG CTCCGGGGTG
GTCCTCGCCG GCCTGACGAC CCCGACCGCC GACCCGGACG CGGACGTCGA GGTCACCCTC
GCGGGCGTCA CCACCAGCGC GAAGCTCTCC GCCTATCCGA CGGTCCAAGC CGCGGTGAAC
ACGGTGCTGG CCACCGCGAC CGTCGCCGCG AACGTGACGG TCGGCCAGCT CAACTCCGCG
CTGGCCGGGC CGCTGGCGAA GCTCGCCGGC GCCCGCATCG CCGGCGCCGA CGTCTTTGCC
GTGCCGCGGC CGTCCTGCGG AGACGTCGCG CTCCGCGGCT GA
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| Protein sequence | MRRQRDERGA VVPFVAVTLT LLIAMAAFAV DLGMQRVVRR DMQALADVVA LDLSRLVNGR
TAAQIEAGYN GFPTISTELG RSVARNRDTL GDAPVVTYKL VHLDAATGLL ETSGGAVKAY
SGTEVPNAVW VQAEGSVDFA FATGSGGAVR TAVAQPSPSA CFRLGSYAAG VSTEDATLLN
TLLTGLLGTS VNLSLASYQA LAGAGVSVMD LVGVDSLAVG SFDELMALDG LTVANVLSAS
ATALQNNGGD AVAVSALQAI AVDAIGPTTI GFADLLSIAT GDSAALGASL NVLDVVTAAA
FAANGSHVLT MPGLGLLLPS LGTVSSSTLD VGNQPTLACG AEGVAEARSG QASTAVSGTL
ADISVDLLLT QFAARTTITT GLVLASAEGL LTDITCGDAT ALTNAEGIDV QVSSALASSV
SLTASIRVTA TVDVGLATVT VDVTTPTTTS SGPSTTPATT VQFRHPPDDY DTAKTFGSGV
VLAGLTTPTA DPDADVEVTL AGVTTSAKLS AYPTVQAAVN TVLATATVAA NVTVGQLNSA
LAGPLAKLAG ARIAGADVFA VPRPSCGDVA LRG
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