| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3246 |
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| Symbol | |
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| ID | 4599184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3447925 |
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| End bp | 3449061 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639777852 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_924435 |
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| Protein GI | 119717470 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.261915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGT CCGAGGAGGA CCGCCTGCTT CGGGTCGCGC TGTCGGCGCT CGGTGAGCCC
GGCGACCCCC GGCTCCTGGA CTGGGTCACC CGGCTCGGGC CAGCCGCGGT CCACGAGCTG
CTGCTGACCG GGCACACGCT CGAGGAGCTC CAGACCGATC CCGACGCGCG CCGCGCGGCC
GAGGACCCGC AGCGGACCCT GGCCCGGGCA GCCGACCGAG GCCTGCGCTT CGTCGTCCCG
GGAGACGAGG AGTGGCCGAC CCAGCTCGAC GACCTGGCCA CGGCCGCTCC ACTGCAGAAC
CGCGGCGGCG CCCCACTCGG CCTGTGGGTG CGCGGCCCGG CCCGGCTCGA CGACCTCGCC
GGGTCCGTCG CCGTCGTCGG GTCCCGGTCC GCCACGACCT ACGGCGCCGA GGTCGCCACC
GACCTCGCGG CTGCGATCGC GGCCGTCGAC CGCGCCGTCG TCTCCGGTGC CGCCTACGGG
ATCGACCAGG CCGCGCACCG CGGGGCGCTC GTCGGCGGCG GGTCGACGGT GGCGGTGCTC
GCGTGCGGCG CCGACCGGTG CTATCCCGCC GCACACCGAG AGCTGATCGA ATACATCGCC
GGCCACGGTG CGGTCGTGTC CGAGGCGCTG CCGGGCTGGT CGCCGACCCA GCTCCGGTTC
CTCGCGCGCA ACCGGCTGAT CGCCGCGCTG AGCGTCGGCA CCGTGGTCGT GGAGGCCGCG
GCGCGCAGCG GCGCGCTCAA CACGGCGAAC TGGGCCACCC GCCTCAACCG GCACGTGCTC
GGCGTGCCCG GGCCGGTGAC CAGCGCGCCG TCGGAGGGCG TGCACCACCT GATCCGCTCC
CAGGCCGCCG TCCTGGTGAC CTCGGGCGCG GACGTGCTCG AGGTGGTCAG TGCCACGGGC
CAGCACCTCG CCGCCGAGCC GCGCGGCCCG GTCCGGTCCC GCGACCGACT CACCACCCGC
CAGCGGCAGG TGCTCGACGC GGTGCCGGTG GCCCAAGCGG CCCCCGAGAC ATCGATCGCC
CGCACCGCCG GCCTCGGTCT CACCGAAGCC CGCAAGGTGC TCGTCGCGCT CGCCGAGCGC
GGCCTCGCCG AGCAGGTCCC GGGCGGTTGG CGGCTCGCCG CACTGGCTCA CCAGTAG
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| Protein sequence | MSASEEDRLL RVALSALGEP GDPRLLDWVT RLGPAAVHEL LLTGHTLEEL QTDPDARRAA
EDPQRTLARA ADRGLRFVVP GDEEWPTQLD DLATAAPLQN RGGAPLGLWV RGPARLDDLA
GSVAVVGSRS ATTYGAEVAT DLAAAIAAVD RAVVSGAAYG IDQAAHRGAL VGGGSTVAVL
ACGADRCYPA AHRELIEYIA GHGAVVSEAL PGWSPTQLRF LARNRLIAAL SVGTVVVEAA
ARSGALNTAN WATRLNRHVL GVPGPVTSAP SEGVHHLIRS QAAVLVTSGA DVLEVVSATG
QHLAAEPRGP VRSRDRLTTR QRQVLDAVPV AQAAPETSIA RTAGLGLTEA RKVLVALAER
GLAEQVPGGW RLAALAHQ
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