| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3229 |
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| Symbol | |
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| ID | 4599167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3430271 |
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| End bp | 3431497 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639777835 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_924418 |
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| Protein GI | 119717453 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.712082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGACT CAGCGAGGTT GGCGGCCCTG GCGCGGGCCG GTGGCGGCGT TCCCCCGTGG
GCGATGTCCG GGATGGGGCG GCGGTCCTTC CTCCGCGGAG CCTCGCTGAC GGCGCTCGCG
GTGGGGGCGC CGGGGCTGCT CTCGGCCTGC GGCACCGAGG GCGCGAAGGT CGACGCCGGC
TCCTGCACGA GCACCGACCT CAGCGCTGAT GAGAAGACGA TCACGTTCGC CAACTGGATC
GGTTACATCG ACCCCGTCAA GAAGCCGGAC TCCACGCTCT CGAAGTTCCA GCAGCAGACC
GGCATCACCG TCGACTACAA GAACGGCGAC GTCAACGACA ACGAGCAGTT CTTCGCCAAG
GTGTCGCCCC AGCTGCAGGA CTGCCGGCCC ACGGACCGTG ATGTCTTCGT CGTGACCGAC
TACATGGCCG CGCGGATGAT CGAGCTCGGC TGGATCCAGA AGCTCGACCA CGCCAACCTG
CCCAACGTCG ACGCGAACCT GATCGACTCC CTGAAGTCGC CCAGCTGGGA CCCGAACCGC
GACTACAGCG TGCCGTGGCA GAGCGGCATG ACCGGCATCT GCTACAACGC CGAGCTCACC
GACCCCGTCT CGAGCTTCGA GGAGCTGCTC ACCCGCCCGG ACCTCAAGGG CAAGATCGAC
CTGCTCAGCG AGATGCGGGA CACGATGCTG TTCATGCTGC TCCTGAACGG CAGCAACCCG
GCGGACTTCA CCGACGACGA GTTCTCCGCC GCGATCGACA GTCTCCAGGG CTACGTCGAC
AGCGGCCAGG TGCGCAGGTT CACCGGCAAC GACTACGTCG ACGACATGAA GTCGGGCGAC
ATCGTCGCCT GCGAGGCGTG GAGCGGCGAC GTCATCAACC TGCTCGGCGG CGGGAAGTTC
AAGTACGTCC CGCCCAGTGA GGGCTTCGCG ATCTGGACCG ACAACATGCT GGTGCCGAAC
AAGGCGGCGC ACAAGTCGAA CGTCGAGGAG CTGATGAACT ACTACTACGA CCCGGTCAAC
GCCGCGAAGC TCGCTGCCTG GAACTACTAC CTCTGCCCGG TCAAGGGTGC CCAGCAGGAG
ATCGCGCAGT TCGACAAGTC CGCAGCCAAG AGCGACTTCA TCTTCCCCGA TGCCAAGACC
ATGGAGTCGG GCCACCAGTT CATGCCGCTG AGTGACACCC AGGAGCGCGA CTACCAGCGC
CGGTTCAACG AGGTGATGGG TGGCTGA
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| Protein sequence | MSDSARLAAL ARAGGGVPPW AMSGMGRRSF LRGASLTALA VGAPGLLSAC GTEGAKVDAG
SCTSTDLSAD EKTITFANWI GYIDPVKKPD STLSKFQQQT GITVDYKNGD VNDNEQFFAK
VSPQLQDCRP TDRDVFVVTD YMAARMIELG WIQKLDHANL PNVDANLIDS LKSPSWDPNR
DYSVPWQSGM TGICYNAELT DPVSSFEELL TRPDLKGKID LLSEMRDTML FMLLLNGSNP
ADFTDDEFSA AIDSLQGYVD SGQVRRFTGN DYVDDMKSGD IVACEAWSGD VINLLGGGKF
KYVPPSEGFA IWTDNMLVPN KAAHKSNVEE LMNYYYDPVN AAKLAAWNYY LCPVKGAQQE
IAQFDKSAAK SDFIFPDAKT MESGHQFMPL SDTQERDYQR RFNEVMGG
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