| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3216 |
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| Symbol | |
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| ID | 4599154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3414046 |
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| End bp | 3415263 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639777822 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_924405 |
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| Protein GI | 119717440 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.018285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGGA TCGGATCCAC GCGGCTGGCG GCCGTGGCCT GCGCGAGCGT GCTCGCACTC
GCCGCCTCCG CCTGCGGCAC GAGCTCGGGA GACGGCGACG GAGGCGGAGC GAAGGCCGGC
GAGAAGCAGG GTGGCTTCAC CGCCCCCGAC GTGCCGATGG CCGAGGCGAT CGGCGACCCG
GAGGGACAGG TGAGCATCCT GGCCTGGCCC GGCTACGCCG AGGACGGGTC GACCGACAAG
TCGATCGACT GGGTCACGCC GTTCGAGAAG GAGAGCGGCT GCCAGGCGAA CGTGAAGTAC
TTCGCGACCT CCGACGAGGC CGTGCAGCTG ATGAAGACCG GCGAGTACGA CGTGGTCTCG
GCGTCCGGCG ATGCGACGTT GCGCCTGATC GCGGGTGGCG ACGTGGCGCC CGTCAACACC
GACCTGCTCA CCAACTACGG CGACATCGCG GACTTCCTGA AGGACCAGCA GTTCAACTCC
GTCGGTGGCC AGATGTACGG CGTGCCGCAC GGCTGGGGCG CCAACCTGCT GATGTACACC
AAGGACGTCG TCAGCCCGGC ACCGACCAGC TGGGGTGCGG TCTTCGACGG CGCGTCGGAG
TACGCCGGCA AGGTCACGGC GTACGACTCG CCGATCTACA TCGCCGACGC CGCGCTGTAC
CTGATGAAGA CGCAGCCCGA CCTCGGGATC AAGGACCCGT ACGCGCTCGA CGAGGACCAG
CTCGCCGCGG CCGTCGACCT GCTCAAGGCG CAGAAGGCGA ACGTCTCGGA GTACTGGTCG
GACTACCTCA AGGAGGTCGC GGCGTTCAAG AGCGGCGACT CGGTGATCGG CACGACGTGG
CAGGTCATCG CGTCGACGAT CGGCGACTCG GTCGAGGCCG TCCTGCCCGA GGAGGGCTCG
ACCGGCTGGT CGGACACCTG GATGATCAGC TCGAAGGCGC CGAACCCCAA CTGTGGCTAT
CTCTGGATGG ACTACATCAC CAGCCCGAAG GCGCAGGCCG CGGTCGCGGA GTACTTCGGC
GAGGCGCCGG CCAACGTGAA GGCGTGCGAC CTGACCTCGG AGGGCTTCTG CGACACCTAC
CACGTGACCG ACGCCGACTA CGCGGCGCAG ATCCACTACT GGACCACGCC GATCGAGCAG
TGCCTGGACG GCCGCACGGA CGTGACGTGC ACCGACTACG GCCAGTGGAC CACCGCGTGG
ACCGAGATCA AGGGGTGA
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| Protein sequence | MRRIGSTRLA AVACASVLAL AASACGTSSG DGDGGGAKAG EKQGGFTAPD VPMAEAIGDP
EGQVSILAWP GYAEDGSTDK SIDWVTPFEK ESGCQANVKY FATSDEAVQL MKTGEYDVVS
ASGDATLRLI AGGDVAPVNT DLLTNYGDIA DFLKDQQFNS VGGQMYGVPH GWGANLLMYT
KDVVSPAPTS WGAVFDGASE YAGKVTAYDS PIYIADAALY LMKTQPDLGI KDPYALDEDQ
LAAAVDLLKA QKANVSEYWS DYLKEVAAFK SGDSVIGTTW QVIASTIGDS VEAVLPEEGS
TGWSDTWMIS SKAPNPNCGY LWMDYITSPK AQAAVAEYFG EAPANVKACD LTSEGFCDTY
HVTDADYAAQ IHYWTTPIEQ CLDGRTDVTC TDYGQWTTAW TEIKG
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