| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3197 |
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| Symbol | |
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| ID | 4599060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3395195 |
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| End bp | 3396964 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639777803 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_924386 |
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| Protein GI | 119717421 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0619868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATGC GGATGTCGAG CCTGTTCGTG CGGACCCTGC GAGAGGACCC CGCGGACGCC
GAGGTGCCGT CGCACCGGCT GCTCGTCCGC GCCGGCTACA TCCGCCGCGC CGCCCCCGGC
ATCTACACCT GGCTGCCGCT GGGCCTGAGG GTGCTCCGCA AGATCGAGAA CGTCATCCGC
GAGGAGATGG ACGCGATCGG CGCCCAGGAG ATGCTGTTCC CGGCGCTGCT GCCGCGCGAG
CCCTACGAGG CGACCAACCG GTGGACGGAG TACGGCGACG GCATCTTCCG GCTCCAGGAC
CGCAAGGGCG CCGACTACCT CCTCGGCCCG ACCCACGAGG AGATGTTCAC GCTCGTCGTG
AAGGACCTCT ACTCCTCCTA CAAGGACCTG CCGCTCTCGA TCTACCAGAT CCAGACGAAG
TACCGCGACG AGGCGCGACC CCGCGCCGGG CTGCTGCGCG GGCGCGAGTT CGTGATGAAG
GACTCCTACT CGTTCGACGT CGACGACGCC GGCCTCGACG TGAGCTACCA GAAGCACCGC
GACGCCTACG TGCGGATCTT CGACCGCCTC GGGTTCGAGT ACGTCATCGT CGAGGCGATG
TCCGGCGCGA TGGGCGGGTC GAAGTCCGAG GAGTTCCTCG CCAAGGCGAG CGTCGGAGAG
GACACCTACG TGCGCTGCAC GTTGTGCGAC TACGCCGCGA ACGTCGAGGC CGTGCACTCG
CCGCCGATCC CGCCCGTGCC GTACGACGAC GCGCCCGCCG CCCACGCCGA GCAGACTCCC
GACACGCCCA CGATCGAGAC GCTCGTGGCC CACCTCAACG AGCGGTTCCC CCGCGAGGAC
CGCCCCTGGG CGGCGTCGGA CACCCTGAAG AACGTGGTGT TCTCGGTCCA CCACCCCGAC
GGCGCCACCG AGGCGCTGGC CGTCGGCCTG CCCGGCGACC GCGAGGTCGA CGCCAAGCGG
CTCGAGGCCC ACCTCGGCGA GGGCGTCGTC TTCGAGCCGT TCGGCGAGGC GGACTTCGCG
GCCCGCCCGA CCCTGGCCAA GGGCTACATC GGCCCCGGGG CGCTGGGGGA GAAGAAGCCG
GCCGGCGTGC GCTACCTGCT CGACCCACGG GTCGTCGAGG GCACCCGCTG GGTGACCGGA
GCCGACGCCG CCGGCAGCCA TGTCATCGAC CTGGTGGCCG GCCGCGACTT CTCCGGCGAC
GGCCTGATCG AGGTGGCCGA GGTCCGCGAC GGCGACCCCT GCCCGCGCGG CGACGGCGGC
ACCCTCGAGA CCGCCCGCGG CATCGAGATG GGCCACATCT TCCAGCTCGG CCGCAAGTAC
GCCGACGCCC TCGACCTCAA GGTCCTCGAC GAGCAGGGCA AGCTCGTCAC GGTGACCATG
GGCTCCTACG GCATCGGGCC CTCGCGCGCC GTGGCCGCCA TCGCCGAGGG CACCCACGAC
GAGCTGGGCC TGGCCTGGCC GCGGGAGGTC GCGCCCGCCG ACGTCCACAT CGTCGCCACC
GGCAAGGACG AGCACGTCTT CGCGGCGGCC GAGCGGATCG CGCACGAGCT CGACAAGCAG
GGTGTCGAGG TGCTCTACGA CGACCGGCCC AAGGTCAGCC CGGGGGTGAA GTTCAAGGAC
GCCGAGCTGA TCGGTGTCCC GACGATCGTC GTGGTCGGCA AGGGCCTCGC CGCGGGCACG
ATCGAGGTCA AGGACCGACG TACCGGCCAG CGGCAGGACG TGCCGGCCGA CCACCTGGTC
GACCGGGTGA TCGCCATCGT GAGGGCATGA
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| Protein sequence | MIMRMSSLFV RTLREDPADA EVPSHRLLVR AGYIRRAAPG IYTWLPLGLR VLRKIENVIR
EEMDAIGAQE MLFPALLPRE PYEATNRWTE YGDGIFRLQD RKGADYLLGP THEEMFTLVV
KDLYSSYKDL PLSIYQIQTK YRDEARPRAG LLRGREFVMK DSYSFDVDDA GLDVSYQKHR
DAYVRIFDRL GFEYVIVEAM SGAMGGSKSE EFLAKASVGE DTYVRCTLCD YAANVEAVHS
PPIPPVPYDD APAAHAEQTP DTPTIETLVA HLNERFPRED RPWAASDTLK NVVFSVHHPD
GATEALAVGL PGDREVDAKR LEAHLGEGVV FEPFGEADFA ARPTLAKGYI GPGALGEKKP
AGVRYLLDPR VVEGTRWVTG ADAAGSHVID LVAGRDFSGD GLIEVAEVRD GDPCPRGDGG
TLETARGIEM GHIFQLGRKY ADALDLKVLD EQGKLVTVTM GSYGIGPSRA VAAIAEGTHD
ELGLAWPREV APADVHIVAT GKDEHVFAAA ERIAHELDKQ GVEVLYDDRP KVSPGVKFKD
AELIGVPTIV VVGKGLAAGT IEVKDRRTGQ RQDVPADHLV DRVIAIVRA
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