Gene Noca_3179 details

Gene Information

• Locus tag: Noca_3179
• ID: 4599042
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 3378111
• End bp: 3378773
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639777785
• Product: hypothetical protein
• Protein accession: YP_924368
• Protein GI: 119717403
• COG category: [S] Function unknown
• COG ID: [COG3786] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCGC CCGCGCCCAC GCAGGCACTG GAACAGCCCG GCACCCGCGG CCGCGCGTGG 
ACGCCACCGT GGGCGCCGCT GGTGCCGGAA CGTACGACGC AGGTCGTGCG CACGATCTCG 
AGCCACCAGT TCTGCCGCAA GGTGTGGTGC ACGGTCACCC AGGCGTGGGA ACGCGATGGC 
GACGGGCACT GGAGCAAGGC GCGCGAGTTC CGCTCGACGA TCGGCCTGCG CGGGTGGGGC 
AAGCAGCGCG AGGGCGACAA CCGCTCACCC GTCGGGGTCT ATCGGATCAA GGTCACGTTC 
ACGACCGGGT CGGAGAATCC CGGCGAGATG CCCTGGCGGC GCCGGCGGCC GACCTCGGTG 
GTCTCCTCCT CCGCCGGGCC GAACTACAAC ACCTGGCTCG AGGCCCGCGG GGTGACCAGC 
GGTGACCGGC CGTCGATGCG GTCCGGCTGG GTCGTCGACT ACAACCGCGT CCGGCTGCGG 
CCCGGGGTCG GCCCGCGGCC GGTGCCGGGC AAGGGGAGCG GGATCTTCTA CCACACCTCC 
AAGCCCGGCC ACCGGTGGGC GCCGACGGCG GGCTGCACCC AGGTCGGGAA CCCGCGCCAG 
ATGCGCTGGC TGCTGACCTG GCTGCGCCCC GAGGCACGCC CGCGGATCGT CCAGGACCGG 
TGA 

 

Protein sequence

MAAPAPTQAL EQPGTRGRAW TPPWAPLVPE RTTQVVRTIS SHQFCRKVWC TVTQAWERDG 
DGHWSKAREF RSTIGLRGWG KQREGDNRSP VGVYRIKVTF TTGSENPGEM PWRRRRPTSV 
VSSSAGPNYN TWLEARGVTS GDRPSMRSGW VVDYNRVRLR PGVGPRPVPG KGSGIFYHTS 
KPGHRWAPTA GCTQVGNPRQ MRWLLTWLRP EARPRIVQDR