Gene Noca_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3135 
Symbol 
ID4595565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3336889 
End bp3337758 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content72% 
IMG OID639777741 
Productcytochrome c, class I 
Protein accessionYP_924324 
Protein GI119717359 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCTCC TGAACCGCTC CGCCGGTCGC CTCTCACGGC ACCGCCGCGG ACCGCTCGCC 
GGCCTCGCCG TCGTGCTGCT CGGCCTGCTC ATGACCGGTG GGCTCTACAC CGTCTTCTCC
CCGGCCCAGG CCGGCTCGGC GGCCGCCAGC GAGGAGCAGA TCGCCAAGGG ACGCGAGCTG
TTCCTGGTCA GCTGCTCGTT CTGCCACGGC CAGAACGGTG AGGGCATCCG GACCCAGAAC
GGCAACCAGC TCGGCCCCTC GCTGGTCGGT GTCGGCGCCG CCGCGGTCGA CTTCCAGGTC
GGCACCGGCC GGATGCCGAT GGCCCGGCCC GGCGCCCAGG TGCCGCGCAA GCCGGAGACG
TTCAACGACG ACGAGATCGC GGCGCTCGCG GCGTACGTCG CCTCGCTCGG CCCCGGCCCG
GCGATCCCCG ACGAGAGCGA CTACAGCATC GAGGGCCTCT CCGACGAGGA GCGCCAGCAG
GCGATCACCA ACGGTGGCCA GATCTTCCTG ACCAACTGCA CCGCGTGCCA CAACTTCGAG
GGCTCCGGTG GCGCCATGCC GCGCGGCGGC TTCGCTCCGA AGATCCGCGG CGTCGAGCCC
CGCTACATCT ACGAGGCGCT GCTCACCGGC CCGCAGAACA TGCCGAACTT CTCGAACGGC
AACCTCTCCC CCGACGAGAA GCGCGACGTG ATCGCGTACC TCGCCTCGCT CGAGGACATG
CCCCAGTACG GCGGCTTCGG GCTCGGCGGC CTCGGCCCGG TCTCCGAGGG TGCTGCCGCC
TGGGTGCTCG GCATCGGCTC CCTGGTCGGC GTGGCGGTCT GGATCGCGGC GCACACGACC
CGCTCGACGA AGAAGAAGGT GGAGGCGTGA
 
Protein sequence
MRLLNRSAGR LSRHRRGPLA GLAVVLLGLL MTGGLYTVFS PAQAGSAAAS EEQIAKGREL 
FLVSCSFCHG QNGEGIRTQN GNQLGPSLVG VGAAAVDFQV GTGRMPMARP GAQVPRKPET
FNDDEIAALA AYVASLGPGP AIPDESDYSI EGLSDEERQQ AITNGGQIFL TNCTACHNFE
GSGGAMPRGG FAPKIRGVEP RYIYEALLTG PQNMPNFSNG NLSPDEKRDV IAYLASLEDM
PQYGGFGLGG LGPVSEGAAA WVLGIGSLVG VAVWIAAHTT RSTKKKVEA