Gene Noca_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3101 
Symbol 
ID4597886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3304470 
End bp3305951 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content74% 
IMG OID639777707 
Productglycerol kinase 
Protein accessionYP_924290 
Protein GI119717325 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.521145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCC TCGCGATCGA CGCCGGCACC ACCGGGGTCA CCGCCGTGGT GGTGGAGCAC 
GACGGCTCGA TCGCGGTCAA GGGCTACCAG GAGTTCGCGC AGCACTTCCC CCAGCCCGGC
TGGGTGGAGC ATTCCCCCGA GGAGATCTGG CAGGCCACCC TGGAGGCGGT CCGGGACGTG
CTCCAGCGGT ACGACGCGTC GCGGCTCGAG GCCGTCGGGA TCACCAACCA GCGCGAGACG
GTGCTGCTCT GGGACCGCGA GACCCTCGGG TCGCCGCGCC GCGCGATCGT CTGGCAGGAC
CGTCGTACCG CCGACCTGTG CACGCGGCTG CGCGAGGCCG GCCACGAGGC GCGGGTCAGC
GAGCTGACCG GGCTGCGCCT GGACCCGTAC TTCTCGGGCA CCAAGCTGAT GTGGCTGGCC
GAGAACGAGC CGCACACCTG GGCGCTGGTC GAGTCGGGCC GCTACGCGAT CGGCACCGTC
GACTCCTACC TGATCGCGCG GATGACCCGT GGCACCTGGC ACGCCACCGA CGTGTCGAAC
GCGTCCCGGA CGCTCCTGCT CGACCTGGAG ACCGGCGAGT GGTCCGACGA GCTGTGCTCG
CTGTTCGGGG TGCCGCGCGA CGCGCTGCCG GAGCTGGTGC CGAACTGGGG CGAGATCGCG
ACCACCGACC CGACGACGTT CCTCGACCTG TCGCTGCCGA TCTCGGGCCT GGCCGGCGAC
CAGCAGTCCG CGCTGTTCGG CCAGACCTGC TTCGACGAGG GCGACTCCAA GTGCACCTAC
GGGACCGGGT CGTTCATCCT CACCAACACC GGCACGACGA TCCAGCGCTC GGACGCCGGA
CTCCTCGCGA CGGCCGCCTG GCGCTCGCCG TCCGGCGAGC TCACCTACGC GACCGAGGGC
GCGATCTTCG TGACCGGTGC CGCCGTGCAG TGGCTGCGCG ACGGGCTGCA GATCGTGGGC
TCGGCCGCCG AGACCGAGCC GATCGCGCGC ACCGTCGCCG ACACCGGCGG GGTCGTCTTC
GTGCCCGCGC TGACCGGCCT GGGCGCGCCG CACTGGGACC CGCACGCCCG GGGCCTGGTC
ATCGGCATCA CCCGCGGCAC CACCCGCGCA CACCTGGTCC GCGCCGCGCT CGAGGCGATC
GCGTTCGAGG TCCGCGACGT GCTCGACACC CTCTCCGGCG CGGGCGCCGG GCTGTCCTCG
CTGCGCGTGG ACGGCGGCGC CTCCGCCAAC AACCTGCTCT GCCAGATCCA GGCCGACCAG
GTCGGCGTAC CGGTCGAGCG CCCGGCGACC GTCGAGACCA CCGCCTTGGG CGCCGCGTTC
CTGGCCGGGC TCGGGGCCGG CGTGTGGGGG TCGACCGACG ACCTCCGCGA GACCTGGCGG
CTGGATCGGC GCTTCGAGCC CGCCCTCGAC CGGCCCACCG CCGACGCCGC CCACGCCCGC
TGGACCGACG CCGTCGAGCG CGCCAAGGAC TGGGCCGACT GA
 
Protein sequence
MSVLAIDAGT TGVTAVVVEH DGSIAVKGYQ EFAQHFPQPG WVEHSPEEIW QATLEAVRDV 
LQRYDASRLE AVGITNQRET VLLWDRETLG SPRRAIVWQD RRTADLCTRL REAGHEARVS
ELTGLRLDPY FSGTKLMWLA ENEPHTWALV ESGRYAIGTV DSYLIARMTR GTWHATDVSN
ASRTLLLDLE TGEWSDELCS LFGVPRDALP ELVPNWGEIA TTDPTTFLDL SLPISGLAGD
QQSALFGQTC FDEGDSKCTY GTGSFILTNT GTTIQRSDAG LLATAAWRSP SGELTYATEG
AIFVTGAAVQ WLRDGLQIVG SAAETEPIAR TVADTGGVVF VPALTGLGAP HWDPHARGLV
IGITRGTTRA HLVRAALEAI AFEVRDVLDT LSGAGAGLSS LRVDGGASAN NLLCQIQADQ
VGVPVERPAT VETTALGAAF LAGLGAGVWG STDDLRETWR LDRRFEPALD RPTADAAHAR
WTDAVERAKD WAD