| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3090 |
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| Symbol | |
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| ID | 4597875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3292202 |
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| End bp | 3293086 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639777696 |
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| Product | endonuclease IV |
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| Protein accession | YP_924279 |
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| Protein GI | 119717314 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.771432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGACC CCGCCCTCCG CAACCCGATC GGGACCCACG TGCTCGTCGG CAAGGGCCTC
GTCGACGGCG CCGTCGCGAA CGCGGACCTG GTCGCCTGCG AGACCTTCCA GGTCTTCACC
GGCAACCCCC GCGGCTGGGC GCTGAGCGAG GGCAAGCCGG CCGACGACGC GCGCTTCCGC
GACCTGATGG CCGCGCGCGG GACCCGGGTG TTCATCCACG CGCCGTACCT CGTGAACCTC
GGCTCGCCGA CCCCGGCGAC CTACGAGCGC TCGGTGGCCT CGGTGGCGCA CAACCTCAAG
CGGGCGGCGG AGATCGGCGC CGAGGGCGTC GTCGTGCACA CCGGGTCGTA CGTCGACCCC
GGCGAGGGCG ACAGCCTCGC GCGGCACGCG CGCGCGATGC GGCAGGTGCG CGAGGGACTC
CTGCCCCTGC TCGACGCCGT CGCCGGCGAC GATGCACCCT GGCTGCTGCT CGAGCCGACC
GCCGGCCAGG GCCGCTCCCT GTGCGCCGGC GTCGAGGACC TCGCGCCGTA CCTCGAGGCC
CTCGACCACC ACCCGAAGGC CGGCATCTGC CTGGACACCT GCCACGTGTT CGCCGCCGGG
GCGCCGCTGG ACGAGCCGGG CGGCACCACC GCGACCGTGG ACCGGGTGGT CGAGATCGGC
GGCCCGGGCC GGCTGCGGCT GGTGCACGCC AACGACTCGA TGGACGTCCG CGGCGCCTTC
AAGGACCGGC ACCAGCGGAT CGGCGAGGGC CACATCGGCG AGGGCGCGTT CACCGAGCTG
TTCGCGCACC CGGCCACCGA AGGCGTGCCG TTCATCCTCG AGACGCCCGA CTCGCGCGAC
GTCGACAACC GCGACATCCC GCTGCTGAAG AAGCTGCGCG GATGA
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| Protein sequence | MLDPALRNPI GTHVLVGKGL VDGAVANADL VACETFQVFT GNPRGWALSE GKPADDARFR
DLMAARGTRV FIHAPYLVNL GSPTPATYER SVASVAHNLK RAAEIGAEGV VVHTGSYVDP
GEGDSLARHA RAMRQVREGL LPLLDAVAGD DAPWLLLEPT AGQGRSLCAG VEDLAPYLEA
LDHHPKAGIC LDTCHVFAAG APLDEPGGTT ATVDRVVEIG GPGRLRLVHA NDSMDVRGAF
KDRHQRIGEG HIGEGAFTEL FAHPATEGVP FILETPDSRD VDNRDIPLLK KLRG
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