Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3075 |
Symbol | |
ID | 4600192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3275296 |
End bp | 3277692 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777681 |
Product | transglutaminase domain-containing protein |
Protein accession | YP_924264 |
Protein GI | 119717299 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.104196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCAC TCACCCGGTC CCGCGGCAGC CTCTCGTCGA GCGCCCTCCT CGCGGCGGTG GCCGCCACGA CCACGTTGGT CGCGGTGTAC GCCTGGCGGG GCTTCACGCA GGCGCCCGGC GGCTTCTTGA ACCCCTTGCT CCTGCTGGGA ATCGTGGTCG CGGCGACCGG CACGGCAACC AGGTGGTGGC GGTGGCCCGG ACCGGCCGTG GTCGCCGCCC AGGTCGTCGT CTCGGGCCTC GTCGCCAGCA TGCTCATCAC CGGGTCGCTG GTCCCGGGCA CCGGCACCCT TGGCGACGTC CGGTCGGCGA TCGTCGCGGC GCTGGACAGC TCCCGTGAGT TCGCGGCACC GGTGCCTGCC ACCGCGCCGC CCATCGACCC GCTGCTGATC CTGTGCGGGC TGGCCTGCCT GCTGCTCGTC GACCTCCTCG CCTGCACGCT GCGCCGGGCG CCGCTCGCGG GCCTGCCGCT GCTGACGATC TACACGATCC CGGTGAGCCT GATCGAGACG TCGATCGCCT GGTGGGTCTT CGTCGGCACG GCGGCCGGCT TCCTCGCGAT GCTCTTCCTC CAGGAGGCCG AGCACGTCAG CCGCTGGGGC CGACCGATCG CCGAGGACCG CGAGACCGGA GACCCGATCT CGCTCGGAGC CGGCGCGCAC GCCGTTCGGC GTACCGCCAC CGGCATCGGC GGGGCCGCCA CCGCCCTCGC GATGGTGCTG CCGCTGCTCG TCCCGACCCT CGGCCTGCAC GTGTTCGACT TCGGGCCCGG CAAGGGCGAC GGGGACAACA TCCGGATCGA GAACCCGGTG GCGGACCTGG TGCGCGACCT CAAGCGCGGC GAGGACACCG ACCTGGTGCG GATCACCACG ACCGAGACCA ATCCGGCGTA CCTGCGGATC CTGGACCTGA ACCGCTTCAC CGACGTCGAG TGGACGCCCG GCGACCGCGA CGTCCCCACC AACCACGGCG CCGACGGCGC GCTGCCGCCG CCGCAGGGCG TCGACGCCGA GGTGACCCGG GAAGAAGTGC CCTACGACGT CACCATCCTG CCGGCGTTCG AGTCGCGGTG GCTGCCGACG CAGTTCCCGG CCAGCAACGT GCAGGCCGAG GGCGACTGGC GCTACGACTC GACCACGATG GACTTCCTGG CCGTTCCCGG GGACCTGACC ACCGCGGACC TGCACTACAC GATGAGCGCG CTCGACCTGG TCCTCAGCCC GAAGCGGCTG CGCGCGGCCG GTTCGTCCGT GGGCCAGGTC AGCGAGATCT TCACGGACCT GCCGCCGAAC CTCCCGCTGG TCGTGCGCCA GCTCGCCGTC CAGGTGACCC AGGATCAGAC CACGCGGTTC GACAAGGCGG TGGCCCTGCA GAACTGGTTC CGCAGCGAGT TCACCTACTC CCTGGAGACG CACGCCTCCG GCAACGGGTA CGACGCTCTC ACCACGTTCC TCGGCGACGG CCCCGACGGC CGGGTGGGGT ACTGCGAGCA GTTCGCCTCG GCGATGGCCG TGATGGCCCG GGTGCTGGGC ATCCCGGCAC GGGTGGCGGT CGGCTTCCTG ACACCGGAGC CGGACGGTCC CAACACCTGG GTCTACAGCT CGCACGACAT GCACACCTGG CCCGAGCTGT TCTTCCGCGG CTCCGGGTGG GTGCGCTTCG AGCCGACCCC GGCCGACCGG GCGACCGGCG TGCCGTCGTA CACGGTCTCC GGCCTGCCGG GCGGCCTGGA CCCCTCCGAC CCCGCGGCGA CGCAATCCAG CACCAGCATC CCGGGGCCGT CGAACCGGGC CACCCAGACC GCGGACCCGA CCGCCGACAC CGGACAGAAC GGCGAGGCCG ACGCCGGCCT CGCGTGGGGA CCGGTCCTCG GCGGCGGCGC CGGACTGCTG GTCGTGGCCG GCCTCCTGCT CCTGCCCCGG CTGGTCCGCC GTCGCCGGCG CGCGCGTCGC CTCACGGTGG CGGGACCGGA GGCGATCTGG GCCGAGCTGC ACGACACCGC ACTGGACCTG GGCGTGCCGT GGCCGGCGGG CCGATCCCCG CGGGCGACCC GCGACGTCCT CGTGGACCAC CTCGGCCTGC CGGTGGACGC GACCAGTGCC GAGCGACCCG CCCACGGCGC CGACATCGCG CCCGAGGGGG CGGCGGCGCT GGACCGGATC GTGCTCGACG TCGAGCGGCT GCGCTATTCG CGCTCCCCCG CCGACGCCGA CCGGCCCCGG CTCCGTGCCG ACGGCCGGAC CTGCATCGCC TCGCTGACCG GCGGCGCTCC TCGCGCGGCC CGGCGCCGGG CGACCTGGTG GCCGCGGTCG GTCCTGGCCT TCGTCAGCCG GGCGCCGCGG GCGGTCGCGC CGACCGTCGA GGCGAGGTAC GGCGGGGTCG TCGACCACGC GAACTGA
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Protein sequence | MAALTRSRGS LSSSALLAAV AATTTLVAVY AWRGFTQAPG GFLNPLLLLG IVVAATGTAT RWWRWPGPAV VAAQVVVSGL VASMLITGSL VPGTGTLGDV RSAIVAALDS SREFAAPVPA TAPPIDPLLI LCGLACLLLV DLLACTLRRA PLAGLPLLTI YTIPVSLIET SIAWWVFVGT AAGFLAMLFL QEAEHVSRWG RPIAEDRETG DPISLGAGAH AVRRTATGIG GAATALAMVL PLLVPTLGLH VFDFGPGKGD GDNIRIENPV ADLVRDLKRG EDTDLVRITT TETNPAYLRI LDLNRFTDVE WTPGDRDVPT NHGADGALPP PQGVDAEVTR EEVPYDVTIL PAFESRWLPT QFPASNVQAE GDWRYDSTTM DFLAVPGDLT TADLHYTMSA LDLVLSPKRL RAAGSSVGQV SEIFTDLPPN LPLVVRQLAV QVTQDQTTRF DKAVALQNWF RSEFTYSLET HASGNGYDAL TTFLGDGPDG RVGYCEQFAS AMAVMARVLG IPARVAVGFL TPEPDGPNTW VYSSHDMHTW PELFFRGSGW VRFEPTPADR ATGVPSYTVS GLPGGLDPSD PAATQSSTSI PGPSNRATQT ADPTADTGQN GEADAGLAWG PVLGGGAGLL VVAGLLLLPR LVRRRRRARR LTVAGPEAIW AELHDTALDL GVPWPAGRSP RATRDVLVDH LGLPVDATSA ERPAHGADIA PEGAAALDRI VLDVERLRYS RSPADADRPR LRADGRTCIA SLTGGAPRAA RRRATWWPRS VLAFVSRAPR AVAPTVEARY GGVVDHAN
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