| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3053 |
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| Symbol | |
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| ID | 4600170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3252101 |
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| End bp | 3252697 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777659 |
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| Product | peptidase A8, signal peptidase II |
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| Protein accession | YP_924242 |
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| Protein GI | 119717277 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.507002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGCAG CGCGAGGAAC GTCGCTGACC GGCGACCAGT CTGATCCGGC CCGGCCCCGA
CCGACCCGAC CGCGACGGCA CCGCCTGCTG GCCGTCTACG CCGCGGTCGC GCTCACGGCG
TACGCCGTCG ACGTCGGCTC GAAGATCCTC GCCGTCGACC GGCTGAGCGG GCGCCCCGAC
GTCCAGCTCG TCGGTGACCT GTTCCAGCTC CACCTGGTGC GCAACCCCGG GGCGGCCTTC
AGCACCGGTA CCGCCTACAC CGAGGTCCTC AGCGTGGTCG CGATCATCGC GGTCCTGGTG
CTGCTCTATC TCGCCCGCCG GATCGGGACC GTCGGCTGGG CGGTCTCGCT GGGCCTGCTG
CTCGCCGGGG TCGCCGGCAA CCTCACCGAC CGGCTGGTGC GCTCGCCCGG CCCGCTGCGC
GGGCACGTCA TCGACTTCTT CATGCTGCCG CACTGGCCGG TGTTCAACGT GGCGGACATC
TGCATCGACG TGGCAGCGGT GCTCATCCTC GTGCAGGTCT ACCGCGGCGT CCGGCTCGAC
GGCACCCGGA CGGCCCGCGA GAGCACGCGG CCGGAGGGGC CGGAGGCGCC GGAGTGA
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| Protein sequence | MQAARGTSLT GDQSDPARPR PTRPRRHRLL AVYAAVALTA YAVDVGSKIL AVDRLSGRPD
VQLVGDLFQL HLVRNPGAAF STGTAYTEVL SVVAIIAVLV LLYLARRIGT VGWAVSLGLL
LAGVAGNLTD RLVRSPGPLR GHVIDFFMLP HWPVFNVADI CIDVAAVLIL VQVYRGVRLD
GTRTARESTR PEGPEAPE
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