| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2989 |
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| Symbol | rpsA |
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| ID | 4595627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3179063 |
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| End bp | 3180535 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639777594 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_924178 |
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| Protein GI | 119717213 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0790572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGCA CGATCTCTGT CCTTCCGGAC TACGACGCAC CGCAGGTCGC GGTCAACGAC
ATCGGGTCCG AAGCGGACTT CCTCGCCGCC ATCGACGAGA CGATCAAGTA CTTCAACGAC
GGTGACATCG TCGCCGGCAC CATCGTCAAG GTCGACCGCG ACGAGGTCCT CCTCGACATC
GGCTACAAGA CCGAGGGCGT CATCCCCTCG CGCGAGCTGT CGATCAAGCA CGACGTCGAC
CCGTCCGAGG TCGTCGCGGT CGGCGACGAG GTCGAGGCCC TGGTCCTCCA GAAGGAGGAC
AAGGAGGGCC GCCTGATCCT GTCCAAGAAG CGCGCCCAGT ACGAGCGCGC CTGGGGCACG
ATCGAGCAGG TCAAGGAGGA GGACGGCGTC GTCGAGGGCA CCGTCATCGA GGTCGTCAAG
GGCGGCCTGA TCCTCGACAT CGGCCTGCGC GGCTTCCTGC CCGCCTCGCT GGTCGAGATG
CGTCGCGTGC GCGACCTCCA GCCGTACGTC GGCCAGACCC TCGAGGCCAA GATCATCGAG
CTCGACAAGA ACCGCAACAA CGTGGTCCTG TCGCGCCGTG CCTGGCTCGA GCAGACCCAG
TCCGAGGTCC GCCACGGCTT CTTGACCCAG CTCCAGAAGG GTCAGATCCG CAAGGGTGTC
GTCTCCTCGA TCGTCAACTT CGGTGCGTTC GTGGACCTCG GCGGCGTCGA CGGCCTCGTG
CACGTCTCCG AGCTGTCCTG GAAGCACATC GACCACCCCT CCGAGGTCGT CGCGGTCGGC
GACGAGGTCA CCGTCGAGGT CCTCGACGTG GACATGGACC GGGAGCGGGT CTCGCTGTCG
CTCAAGGCGA CGCAGGAGGA CCCCTGGCAG CACTTCGCCC GGACCCACCA GATCGGTCAG
ATCGTGCCGG GCAAGGTCAC CAAGCTGGTG CCGTTCGGCG CGTTCGTCCG CGTCGAGGAG
GGCATCGAGG GCCTGGTGCA CATCTCCGAG CTCGCCGAGC GCCACGTCGA GATCCCCGAG
CAGGTCGTCC AGGTCAACGA CGACGTGATG GTCAAGATCA TCGACATCGA CCTCGAGCGG
CGCCGGATCT CGCTGTCGCT CAAGCAGGCC AACGAGACCG CGACCGCGGC CGACGTCGAG
GACTTCGACC CCACGCTGTA CGGCATGGCG GCGACCTACG ACGAGCAGGG CAACTACGTC
TACCCCGAGG GCTTCGACCC CGAGACCGGC GAGTGGCTCG AGGGCTACGA GGAGCAGCGC
GCGGTCTGGG AGGACCAGTA CGCCAAGGCG CACGCCCGCT GGGAGGCGCA CGTCAAGCAG
CAGGCCGAGG CCGCCAAGGC CGAGGTCGAG GCCGGCGAGG CGACGTCGTA CTCCAGCGGC
GGCACCGACA CCGACAGTGC CGAGACCGGC GGCTCGCTCG CCTCGGACGA GGCGCTGCAG
GCTCTGCGCG AGAAGCTCAC CGGCGGCAAC TGA
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| Protein sequence | MTSTISVLPD YDAPQVAVND IGSEADFLAA IDETIKYFND GDIVAGTIVK VDRDEVLLDI
GYKTEGVIPS RELSIKHDVD PSEVVAVGDE VEALVLQKED KEGRLILSKK RAQYERAWGT
IEQVKEEDGV VEGTVIEVVK GGLILDIGLR GFLPASLVEM RRVRDLQPYV GQTLEAKIIE
LDKNRNNVVL SRRAWLEQTQ SEVRHGFLTQ LQKGQIRKGV VSSIVNFGAF VDLGGVDGLV
HVSELSWKHI DHPSEVVAVG DEVTVEVLDV DMDRERVSLS LKATQEDPWQ HFARTHQIGQ
IVPGKVTKLV PFGAFVRVEE GIEGLVHISE LAERHVEIPE QVVQVNDDVM VKIIDIDLER
RRISLSLKQA NETATAADVE DFDPTLYGMA ATYDEQGNYV YPEGFDPETG EWLEGYEEQR
AVWEDQYAKA HARWEAHVKQ QAEAAKAEVE AGEATSYSSG GTDTDSAETG GSLASDEALQ
ALREKLTGGN
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