| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2951 |
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| Symbol | |
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| ID | 4595735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3136463 |
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| End bp | 3138217 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639777556 |
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| Product | major facilitator transporter |
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| Protein accession | YP_924140 |
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| Protein GI | 119717175 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.380575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGTGA GGTCCCCACG GGTCCTGCTC TCGCTGGCCG CGGTGGCCGT GGCCTTCGCC
GCGGCCGACA CCTACGTCGT CGTGCTGGCG CTGCCGGACA TGATGGCGAG CACCGGGATC
CCCGTGGACC AGCTGCAGCG CGCGGCGCCG ATCATCTCCG GCTTCCTGCT CGGATACGTC
GCGATGCTGC CGCTGATCGG CCGGATCGCG GACCTGCGGG GCCGGGTGCC GGTGCTCGTC
GCCGCGCTCC TGGTCTTCGC AGTCGGCTCC CTGGTCACCA CGCTCGCCTA CGACCTGCCC
TCGATGGTCT CGGGACGGTT CCTGCAGGGC GTGGGCGGTG GCGGCCTGGT CCCGGCGACC
CTGGCCCTCG TCGCCGACCT GTACCCCACC GAGCGCCGCG GGGTGCCGCT CGGGGTCGTC
TCGGCGGTGC AGGAGCTCGG CAGCGTGCTC GGGCCGCTGT TCGGGGCACT GGTGCTCGCG
GTCGCCGACT GGCGAGCCAT CTTCTTGGTC AACGTCGCGG TCGGACTCGT CCTGGCCGCC
GCGATCCGCA AGCTCGCCGG GCCACGGGGT GGTCTCGACA CGCCGTCGCT CGCGACCCAC
TTCGACTGGC TCGGGCTGGC GCTGGCCGTG GGGACCCTGG TCTCGGGCGC GCTCGTGTTC
GTCGAGCCCA GCCAGCTCAT GCGCGACCTG ACCTGGGGCC GGCTGTTCGT CCCGGTGACG
GGGTCCGGCC GCTGGCTGAC CCCGCTCGGG CTGACCGCGA CGGGCGGCCT GCTGCTGCTC
GCCGTGCACT GCTCGACGGC GCGCCGGCCG CTCCTGGACG TGCGCGCCTG GGTGCGCACC
CTGCGCGCGG CCGACCTGCT CGGCTCGCTG TTCCTGGGGC TCGCGCTCGC CGGGGTGATC
CTCGCGTTCG CGACCGCCGA CCCCAAGGTG CAGGTCTTCT CCGACCAGGG CCTGTGGTAC
CTCCTCGCCT CCGCCCTGGC CGCCGTCGCC TTCGTGCTGC ACCTGCGCCG CACACCGGCG
CCCCTGGTCC CGGCCGGCAC GCTCCGGCGT ACCCCCGCGT GGGGCGCGAT GGCGGTGAGC
TTCTTCATCG GGGCCGCGCT GATCGCCGCC CTGATCGACA TCCCGCTGTT CGCGCGCACC
ACCGTCTACC CCGACTCCCA GCTGATGGCG GCGCTGGTCC TGGTCCGGTT CCTCGTCGCG
CTCCCGCTCG GCGCCGTCGT CGGGGGGTAC CTCACCCGCA CGCTCAGCGC CGGGCTGGTG
ACCGCCATCG GGATGGCCTG CGCGGCGGCC GGCTTCCTCT GGATGGCGAC CTGGGACCTC
GAGAGCCTCG ACCGGGCGAG TGCCACGGTG CCGCTGCTGC TCGGCGGCCT CGGGTTCGGG
CTCGCCCTCG CACCGGTGAA CGCCGCGGTG CTCGCCAGCA CCGACGACGA CGTGCACGGG
CTGGCCAGCG CGTTCGTCGT GGTCGCCCGG ATGGTCGGCA TGCTGGTCGG GATCTCCGCC
CTCACCACGA TCGGCCTGCG CCGCTACTAC GCCGAGCAGG CCGACCTGCC GCCCGCTCGC
GAGGTGTGCG ACGGGCGGAC CCGCTGCTCG GAGTTCACCG ACCTGCTCAA GGTCGCGGGC
ATCGCCCAGG AGCACACCGT CTTCACCGGC GCCGCGGTCT GCGCGGTCGG CGCGGCAGTC
CTCGCCCTGG TGCTGTTCCG GGGTGCGGCG ACCCGGGCGA TCTCGACCGG CGACCTGCTC
CGCGCCACCG GGTGA
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| Protein sequence | MTVRSPRVLL SLAAVAVAFA AADTYVVVLA LPDMMASTGI PVDQLQRAAP IISGFLLGYV
AMLPLIGRIA DLRGRVPVLV AALLVFAVGS LVTTLAYDLP SMVSGRFLQG VGGGGLVPAT
LALVADLYPT ERRGVPLGVV SAVQELGSVL GPLFGALVLA VADWRAIFLV NVAVGLVLAA
AIRKLAGPRG GLDTPSLATH FDWLGLALAV GTLVSGALVF VEPSQLMRDL TWGRLFVPVT
GSGRWLTPLG LTATGGLLLL AVHCSTARRP LLDVRAWVRT LRAADLLGSL FLGLALAGVI
LAFATADPKV QVFSDQGLWY LLASALAAVA FVLHLRRTPA PLVPAGTLRR TPAWGAMAVS
FFIGAALIAA LIDIPLFART TVYPDSQLMA ALVLVRFLVA LPLGAVVGGY LTRTLSAGLV
TAIGMACAAA GFLWMATWDL ESLDRASATV PLLLGGLGFG LALAPVNAAV LASTDDDVHG
LASAFVVVAR MVGMLVGISA LTTIGLRRYY AEQADLPPAR EVCDGRTRCS EFTDLLKVAG
IAQEHTVFTG AAVCAVGAAV LALVLFRGAA TRAISTGDLL RATG
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