| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2829 |
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| Symbol | |
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| ID | 4596119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2998464 |
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| End bp | 2999645 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777434 |
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| Product | GAF domain-containing protein |
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| Protein accession | YP_924018 |
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| Protein GI | 119717053 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGCG ACCCGGTCGA GTCCACGGAA CGGCGCCGCC AGCGCGCCGT CGAGAGCCTG
GCCCTCTCCG GCCGCAGTGA GGAGCGCCTG GACCGGATCG CGCGCCTGGG CGCCACCCTG
TTCCGCGTCG AGCAGGCCAC CGTCACGGTC CTCGACGGCG ACCACGCGTG GTTCCCGGGA
GCATTCGGCC TGGAGGTGCG CTCCGCACCC CGCGGGGAGA CCTTCAGCGA CCGCACCAGC
GCGACCGACG ACCTCGTCCT GGTCGAGGAC GCCGCGCGCG ACCCCCGGTT CGCCGACCTG
CCGGCGGTGA CCGACGCGGG CATCCGGTTC TACGCCGGTG TGCCCCTGCT CGACCCGACC
GGCAACGCCG TCGGGACGTT CTGCCTCTAC GACCGGTCGG ACCGCACGCT GGACGCGGAC
GAGCTGCAGA CGCTCCAAGA CCTCGCGGCG TGGGCACAGC ACGAGCTCGT CGCGTCGGGC
GAGATGGTCC GCGCCAGCCA GGTCCAGGCG TCGATGCTGC CCTCGAAGCC GGTCCGGATC
GGCGAGTGGG AGCTGAACGG CGCCTGCGTC CCCGCGCTCG CGGTCGGCGG CGATCTCTTC
GACTACGCCG TGGGCAACGA GGTCGCGCAC CTGGGGCTCG GCGACGTCAT GGGCAAGGGC
ACCGGCGCGG CCCTGCTCGG CGCCGGCGTC CGCGCCGCGG TCCGGGGCAC CCACGAGGCC
GTCGTCTCCG GCGTCGACCT CGGCATCACG GTGACCCAGG TCGCCCGCAG CATGGCCCCG
GACCTGATGC GCGCGGAGTC CTTCGTGACG CTCTTCGAGG CCGCCGTCGA CCTCGAGGAC
GGGTTCCTGC GATACGTCGA CGCGGGGATG GGGCTGTGCC TGGTCGTGCG CGCCGACGGC
ACGGTCGACC GGCTCGACAG CGAGGACCTC CCGATCGGGG TGCTGTTCGA CGACCACTGG
ACCGAGCACA CGACGACCAT CGAGCCGGGC GACCGCCTGC TGCTGTTCAG CGACGGCCTG
CTCGACCTGG TCGACGACCC GGACCGGTGG TGGGAGCCGA TCGGCCGCCT GGTCGCCGGC
CACGAGGACA CGACCAGCCT GCTGTCCGCG ATCGTCGAGC TGGCCTTCGA GCAGGTGCAG
CTCGACGACG TCACGGCGGT CGCGATGTTC CGGCACCGGT AG
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| Protein sequence | MSRDPVESTE RRRQRAVESL ALSGRSEERL DRIARLGATL FRVEQATVTV LDGDHAWFPG
AFGLEVRSAP RGETFSDRTS ATDDLVLVED AARDPRFADL PAVTDAGIRF YAGVPLLDPT
GNAVGTFCLY DRSDRTLDAD ELQTLQDLAA WAQHELVASG EMVRASQVQA SMLPSKPVRI
GEWELNGACV PALAVGGDLF DYAVGNEVAH LGLGDVMGKG TGAALLGAGV RAAVRGTHEA
VVSGVDLGIT VTQVARSMAP DLMRAESFVT LFEAAVDLED GFLRYVDAGM GLCLVVRADG
TVDRLDSEDL PIGVLFDDHW TEHTTTIEPG DRLLLFSDGL LDLVDDPDRW WEPIGRLVAG
HEDTTSLLSA IVELAFEQVQ LDDVTAVAMF RHR
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