Gene Noca_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2724 
Symbol 
ID4597292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2897503 
End bp2898606 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content71% 
IMG OID639777330 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_923914 
Protein GI119716949 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.436171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCC CGATCTGCGA CACGTTCGGG ATCGACTACC CGATCTTCGC CTTCACCCCG 
TCCGAGCACG TCGCCGCCGC GGTCTCCCGC GCCGGGGGCC TGGGGGTCCT CGGCTGTGTC
CGCTTCAACG ACCCCGACGA GCTCGAGCGC ACCCTGAGCT GGCTCGACGA GAACACCGAC
GGCAAGCCGT ACGGCGTCGA CATCGTGATG CCGATGAAGA TCCCGACCGA GGGCACCTCG
GTCGACCTGA AGTCGATGAT CCCCGAGGAG CACGTGAGCT TCGTCGAGCG GACCCTGCAG
CGGCTCGGCG TCCCGCCGCT CCCCGAGGGC GAGGGTCGCG ACGGGGTGCT CGGCTGGCTG
CACTCGGTCG CCCGGTCGCA CCTCGACGTC GCGCTCAACC ACCGGACGGT GCTGATCGCG
AACGCGCTCG GCTCGCCCCC GGTCGACGTG ATCGAGAAGT GCCACGAGCA CGGGATCCTG
GTCGCCGCCC TCGCCGGGGC TGCGAAGCAC GCGCGCTCGC ACGTCGCCAA CGGCGTCGAC
GTCATCGTCG CCCAGGGCTA CGAGGCCGGC GGGCACACCG GCGAGGTGGC GAGCATGGTG
CTCCAGCCCG ACATCGTCGA CGCGGTCGGG CCCGACGTCC CCGTGCTCGG AGCCGGCGGG
ATCGGCTCGG GCCGGCAGGT CGCGGCCTCC CTCGCGCTGG GCTCGCAGGG CGTGTGGACC
GGATCGATCT GGCTGGGCAC CGAGGAGTAC CAGAAGCTGC AGTCCAACGC GGGCTGGACC
GAGGCGTTCA CCCGGGCGAC CTCCTCCGAC ACCGTCCGCA CCCGCATCTA CACGGGCAAG
CCGGCCCGGC TGCTGAAGAC GAAGTGGACC GAGGCGTGGG CCGAGCAGGA CGCACCCGAG
CCGCTGCCGA TGCCGCTGCA GAACCTCCTG GTCGCCGACG CCCACAACCG GATCAACGCC
TCCGGCGACC CCGACGTGAT CTCGATGCCG ATCGGCCAGA TCGTCGGCCG GATGAACCAG
GTGCGCCCGG TCGCGGAGGT GATGGCCAGC CTGGTCGCGG AGTTCGAGGA GGCGGTGGGT
CGCCTGGAGT CGATCCGGAA GTAG
 
Protein sequence
MRTPICDTFG IDYPIFAFTP SEHVAAAVSR AGGLGVLGCV RFNDPDELER TLSWLDENTD 
GKPYGVDIVM PMKIPTEGTS VDLKSMIPEE HVSFVERTLQ RLGVPPLPEG EGRDGVLGWL
HSVARSHLDV ALNHRTVLIA NALGSPPVDV IEKCHEHGIL VAALAGAAKH ARSHVANGVD
VIVAQGYEAG GHTGEVASMV LQPDIVDAVG PDVPVLGAGG IGSGRQVAAS LALGSQGVWT
GSIWLGTEEY QKLQSNAGWT EAFTRATSSD TVRTRIYTGK PARLLKTKWT EAWAEQDAPE
PLPMPLQNLL VADAHNRINA SGDPDVISMP IGQIVGRMNQ VRPVAEVMAS LVAEFEEAVG
RLESIRK