Gene Noca_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2578 
Symbol 
ID4597126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2744186 
End bp2745316 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID639777184 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_923769 
Protein GI119716804 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTCCCG TGATCTTGAT CCTGCTGGCG ATCCTGGTCC TGTTCGTGAT CGTGATGCTC 
GCCAAGACCG TGCGGATCAT CCCGCAGGCC CGGGCCGGCA TCGTCGAGCG CTTCGGCAAG
TACAAGGAGA CGCTGCCCGC GGGCCTGAAC ATCGTGGCGC CGTTCATCGA CCGCGTCCGC
TACATCATCG ACCTGCGCGA GCAGGTGGTG AGCTTCCCGC CGCAGCCGGT GATCACCGAG
GACAACCTCG TGGTGTCGAT CGACACTGTC ATCTACTTCC AGGTGACCGA CCCGGTCGCC
GCGACGTACG AGATCGCCAA CTACATCCAG GCCATCGAGC AGCTCACGAT GACCACCCTG
CGCAACATCG TCGGCGGCAT GGACCTCGAG GAGACGCTGA CCAGCCGCGA CTCGATCAAC
TCCGGACTGC GCGGCGTACT GGACGAGGCC ACCGGCAAGT GGGGCATCCG CGTCAACCGG
GTCGAGCTCA AGGGCATCGA TCCGCCGCCG TCGATCAAGG ACTCGATGGA GAAGCAGATG
CGCGCCGACC GCGAGAAGCG CGCGGTGATC CTCACCGCCG AGGGCCAGCG GCAGGCCGCG
ATCCTGACCG CCGAGGGCGC CAAGCAGTCC TCGATCCTGA ACGCCGAGGG TGCCCGGGAG
TCCCAGATCC TGCGGGCTCA GGCCGACCGG GAGTCCTCGA TCCTGCGTGC CCAGGGTGAG
GGGCAGGCGA TCCAGACGGT GTTCCAAGCG ATCCACGACG GTCGCCCGGA CCAGTCGCTG
CTGGCCTACC AGTACCTCCA GATGATGCCG AAGATCGCCG AGGGCGACGC GAACAAGGTG
TGGATCGTGC CGAGCGAGAT CGGCCGGGCG CTGGAGGGCC TGGGCTCGAC GATGAACAGT
CTCCAGGGCA TCCCGCAGCA CGTCGACGGG CCGGCCAAGC GGGTCGACAT GGGCCCCTCG
GAGCCCGCCG TCCCGGGCCC GGACGCGCAG CTGCGCCAGA CCAACGCCGC CGTCGAGGCC
GCGATCGCCG AGGCGGGCCG GGCGGCCAAT CCGGGGAAGG GCGCCGACGC GGAGACGCCG
ACCGCGACCG ACCCGGCCGT CGACCCCGGT GAGGTGCCAC CCGCCCAGTG A
 
Protein sequence
MPPVILILLA ILVLFVIVML AKTVRIIPQA RAGIVERFGK YKETLPAGLN IVAPFIDRVR 
YIIDLREQVV SFPPQPVITE DNLVVSIDTV IYFQVTDPVA ATYEIANYIQ AIEQLTMTTL
RNIVGGMDLE ETLTSRDSIN SGLRGVLDEA TGKWGIRVNR VELKGIDPPP SIKDSMEKQM
RADREKRAVI LTAEGQRQAA ILTAEGAKQS SILNAEGARE SQILRAQADR ESSILRAQGE
GQAIQTVFQA IHDGRPDQSL LAYQYLQMMP KIAEGDANKV WIVPSEIGRA LEGLGSTMNS
LQGIPQHVDG PAKRVDMGPS EPAVPGPDAQ LRQTNAAVEA AIAEAGRAAN PGKGADAETP
TATDPAVDPG EVPPAQ