Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2578 |
Symbol | |
ID | 4597126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2744186 |
End bp | 2745316 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639777184 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | YP_923769 |
Protein GI | 119716804 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCTCCCG TGATCTTGAT CCTGCTGGCG ATCCTGGTCC TGTTCGTGAT CGTGATGCTC GCCAAGACCG TGCGGATCAT CCCGCAGGCC CGGGCCGGCA TCGTCGAGCG CTTCGGCAAG TACAAGGAGA CGCTGCCCGC GGGCCTGAAC ATCGTGGCGC CGTTCATCGA CCGCGTCCGC TACATCATCG ACCTGCGCGA GCAGGTGGTG AGCTTCCCGC CGCAGCCGGT GATCACCGAG GACAACCTCG TGGTGTCGAT CGACACTGTC ATCTACTTCC AGGTGACCGA CCCGGTCGCC GCGACGTACG AGATCGCCAA CTACATCCAG GCCATCGAGC AGCTCACGAT GACCACCCTG CGCAACATCG TCGGCGGCAT GGACCTCGAG GAGACGCTGA CCAGCCGCGA CTCGATCAAC TCCGGACTGC GCGGCGTACT GGACGAGGCC ACCGGCAAGT GGGGCATCCG CGTCAACCGG GTCGAGCTCA AGGGCATCGA TCCGCCGCCG TCGATCAAGG ACTCGATGGA GAAGCAGATG CGCGCCGACC GCGAGAAGCG CGCGGTGATC CTCACCGCCG AGGGCCAGCG GCAGGCCGCG ATCCTGACCG CCGAGGGCGC CAAGCAGTCC TCGATCCTGA ACGCCGAGGG TGCCCGGGAG TCCCAGATCC TGCGGGCTCA GGCCGACCGG GAGTCCTCGA TCCTGCGTGC CCAGGGTGAG GGGCAGGCGA TCCAGACGGT GTTCCAAGCG ATCCACGACG GTCGCCCGGA CCAGTCGCTG CTGGCCTACC AGTACCTCCA GATGATGCCG AAGATCGCCG AGGGCGACGC GAACAAGGTG TGGATCGTGC CGAGCGAGAT CGGCCGGGCG CTGGAGGGCC TGGGCTCGAC GATGAACAGT CTCCAGGGCA TCCCGCAGCA CGTCGACGGG CCGGCCAAGC GGGTCGACAT GGGCCCCTCG GAGCCCGCCG TCCCGGGCCC GGACGCGCAG CTGCGCCAGA CCAACGCCGC CGTCGAGGCC GCGATCGCCG AGGCGGGCCG GGCGGCCAAT CCGGGGAAGG GCGCCGACGC GGAGACGCCG ACCGCGACCG ACCCGGCCGT CGACCCCGGT GAGGTGCCAC CCGCCCAGTG A
|
Protein sequence | MPPVILILLA ILVLFVIVML AKTVRIIPQA RAGIVERFGK YKETLPAGLN IVAPFIDRVR YIIDLREQVV SFPPQPVITE DNLVVSIDTV IYFQVTDPVA ATYEIANYIQ AIEQLTMTTL RNIVGGMDLE ETLTSRDSIN SGLRGVLDEA TGKWGIRVNR VELKGIDPPP SIKDSMEKQM RADREKRAVI LTAEGQRQAA ILTAEGAKQS SILNAEGARE SQILRAQADR ESSILRAQGE GQAIQTVFQA IHDGRPDQSL LAYQYLQMMP KIAEGDANKV WIVPSEIGRA LEGLGSTMNS LQGIPQHVDG PAKRVDMGPS EPAVPGPDAQ LRQTNAAVEA AIAEAGRAAN PGKGADAETP TATDPAVDPG EVPPAQ
|
| |