Gene Noca_2526 details

Gene Information

• Locus tag: Noca_2526
• Symbol: uvrC
• ID: 4597857
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 2693997
• End bp: 2695997
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639777132
• Product: excinuclease ABC subunit C
• Protein accession: YP_923717
• Protein GI: 119716752
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.775537
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCTCCTG CTCGACCGCC CCGCTCCACG CGAGGCGCGC TGTCCTACCG GCCGCAGCCC 
GGCTCCATCC CCACCCAGCC GGGGGTCTAC CGGTTCCGCG ACGCCCGCGG GCGGGTGATC 
TACGTCGGCA AGGCGAAGAA CCTGCGCGCC CGGCTGTCGT CGTACTTCCA GGACGTCGCA 
CACCTGCACC CGCGCACCGC CACGATGGTG ACGACCGCTG CGAGCGTCGA GTGGACGGTC 
GTCAAGACCG AGGTCGAGGC GCTGCAGCTG GAGTACTCCT GGATCAAGGA GTTCGACCCG 
CGGTTCAACG TGAAGTACCG CGACGACAAG TCGTACCCGT GGCTCGCGGT CACCGTGGGC 
GAGGAGTTCC CGCGCGTCAT GGTCGGCCGC GGCGCCAAGC GCAAGGGCAC CCGCTACTTC 
GGGCCCTACA GCCACGCCTG GGCGATCCGC GAGACCGTCG ACCTGCTGCT GCGGGTGTTC 
CCGATGCGCT CGTGCAGCAA CGGGGTGTTC AAGCGCTCGG CGCAGATCGG CCGGCCGTGC 
CTGCTCGGCT ACATCGACAA GTGCGCGGCG CCGTGCGTCG GCAACGTGAC CGCCGAGGAG 
CACCGGGCGA TCGTCGACGA CTTCTGCGAC TTCATGGCCG GCCACACCAC CGCGTTCGTG 
AAGCGCATCG AGCGCGAGAT GTACGCCGCC TCCGACGCGC TCGACTTCGA GAAGGCGGCA 
CGCCTGCGCG ACGACCTCGG TGCCCTCAAC AAGGCCCTGG AGAAGCAGGC CGTGGTGCTC 
GGCGACGGCA CCGACGCGGA CGTGATCGCG CTCGCCGAGG ACCCGCTCGA GGTCGCGGTG 
CAGATCTTCT ACGTGCGCGG CGGACGGATC CGCGGTCAGC GCGGCTGGGT GGCCGATCGC 
GTGGACGAGG GCGGCACCGC CGAGCTGGTC GACGACTTCC TCCTCCAGCT GTACGCCGGT 
GCGGGTGCGG ACGAGATCCC CCGCGAGATC CTGGTCCCGG CCCTGCCGCC GGACGTGGCG 
ACGTACGAAT CCCTCCTCGG CGACCTCCGC GGCTCGAAGG TGGCGATCCG GGTGCCACAG 
CGCGGTGACA AGAGGAACCT GCAGGAGACC GTCGCGCAGA ACGCCGGCCA GGCGCTGGCG 
CTGCACAAGA CCAAGCGGGC CAGCGACCTC ACGACCCGCA ACCGGGCGCT GGAGGAGATC 
CAGGACGCCC TCGGGCTGGA CGAGGTCCCG TTGCGGATCG AGTGCTACGA CGTCTCCAAC 
CTCCAGGGGA CCGAGGTGGT TGCGTCGATG GTGGTCTTCG AGGACGGGCT CGCCCGCAAG 
AGCGAGTACC GCCGCTTCGT GATCCGCGGC GTGGACGGCC AGAACGACGT CGCGTCCATG 
GACGAGGTGA TCACCCGCCG GTTCCGTCGA CTGCTCGACG AGCAGGGGAC CAGCCAGTCG 
GTGGTCACCG AGAGCGGCCC GATGCTCGTG GATCCCGAGA CCGGTCGGCC GCGCAAGTTC 
GCCTACGCAC CGGGCCTCGT GGTGGTCGAC GGCGGGCCGC CCCAGGTGGC CGCGGCCCAA 
CGGGCGCTGA GCGAGCTCGG GATCGTCGAC ATCCCCGTGT GCGGGCTGGC CAAGCGCCTG 
GAGGAGGTGT GGCTCCCTGG GCAGGAGGAC CCGGTGATCC TGCCCAGGTC CAGCGAGGGG 
CTCTACCTGC TCCAGCGGAT CCGTGACGAG GCGCACCGCT TCGCGATCAC CCACCACCGG 
TCGCGGCGCT CGAAGTCGAT GGTGGAGAGC CTGCTCGACG ACGTGCCGGG GCTCGGTGAG 
GTGCGTCGCA AGACGCTGCT CAAGCACTTC GGCTCACTGA AGCGGCTGCG TGCGGCCACC 
GTGGACGAGA TCGCTCTGGT GCCGGGCATC GGTCCGCGCA CCGCCGGCGC GATCAAGGAT 
GCGTTGGCCC GGACCAGCCG CGAGACTGGG CCTGCCATCG TCAGCGTCAA CACCGCCACC 
GGCGAGATCG AGGAGGGCTA G 

 

Protein sequence

MPPARPPRST RGALSYRPQP GSIPTQPGVY RFRDARGRVI YVGKAKNLRA RLSSYFQDVA 
HLHPRTATMV TTAASVEWTV VKTEVEALQL EYSWIKEFDP RFNVKYRDDK SYPWLAVTVG 
EEFPRVMVGR GAKRKGTRYF GPYSHAWAIR ETVDLLLRVF PMRSCSNGVF KRSAQIGRPC 
LLGYIDKCAA PCVGNVTAEE HRAIVDDFCD FMAGHTTAFV KRIEREMYAA SDALDFEKAA 
RLRDDLGALN KALEKQAVVL GDGTDADVIA LAEDPLEVAV QIFYVRGGRI RGQRGWVADR 
VDEGGTAELV DDFLLQLYAG AGADEIPREI LVPALPPDVA TYESLLGDLR GSKVAIRVPQ 
RGDKRNLQET VAQNAGQALA LHKTKRASDL TTRNRALEEI QDALGLDEVP LRIECYDVSN 
LQGTEVVASM VVFEDGLARK SEYRRFVIRG VDGQNDVASM DEVITRRFRR LLDEQGTSQS 
VVTESGPMLV DPETGRPRKF AYAPGLVVVD GGPPQVAAAQ RALSELGIVD IPVCGLAKRL 
EEVWLPGQED PVILPRSSEG LYLLQRIRDE AHRFAITHHR SRRSKSMVES LLDDVPGLGE 
VRRKTLLKHF GSLKRLRAAT VDEIALVPGI GPRTAGAIKD ALARTSRETG PAIVSVNTAT 
GEIEEG