Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2504 |
Symbol | |
ID | 4597835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2672374 |
End bp | 2673105 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639777110 |
Product | hypothetical protein |
Protein accession | YP_923695 |
Protein GI | 119716730 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00378387 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACTGC ACGGAACGCT GTTGGAGGAG TTCAGGGAGA AGTCGTCGAC CGACCCGTTC TCCCTGCAGA ACAAGAAGCT GCTGAAGATC GACATGGGCT ACGGTCCGGT CTGGGCCAAG ACGGGCTCGA TGGTCGCCTA CCAAGGCGAT GTCCGGTTCG AGAACAAGGG CTCGGGTGGC CTGGGCAAGA TGCTGAAGCA GGCGGTGACC GGCGAGGGCG TCGACATGAT GCAGTGCACC GGCAGCGGTG AGCTGTTCGT GGCCGACTTC GCCGCCGACG TCCAGGTGCT CTACCTGGAG AACGACCTGG TGTCGGTGAA CGGATCCAGC GTGCTGGCCT TCTCCTCCTC CATCGAGTGG GAGATCCACC GGGTCCAGGC CCGCGGCGCG GTGATGACCG GCGGGCTCTA CAACGTGTCG CTGCGCGGCA CCGGCTACGT CGCCGTCACC ACCAGCGGCG AGCCCGTGGC ACTCGACGTC GCGAGCGCGC CGACGTTCGC CGACGCACAG GCGGTCGTGC TGTGGACCTC CGGGGTGTCC ATGGACATCC GGGTCGACAC CGGGGGCGTG AAGTCCCTGG TGCGCGGGGG CACGGGCGAG ACGTTCCAGA TGGCGTTCGG CGGTCAGGGG TACGTCGTCG TCCAGCCGAG CGAGTCCGTG ATCACCGGCG GCCACCAGGC GGCCACGGGC AAGAGCAGCG GCGGGGGGCT CGGCGGGCTG CTCGGCGGCT GA
|
Protein sequence | MPLHGTLLEE FREKSSTDPF SLQNKKLLKI DMGYGPVWAK TGSMVAYQGD VRFENKGSGG LGKMLKQAVT GEGVDMMQCT GSGELFVADF AADVQVLYLE NDLVSVNGSS VLAFSSSIEW EIHRVQARGA VMTGGLYNVS LRGTGYVAVT TSGEPVALDV ASAPTFADAQ AVVLWTSGVS MDIRVDTGGV KSLVRGGTGE TFQMAFGGQG YVVVQPSESV ITGGHQAATG KSSGGGLGGL LGG
|
| |