Gene Noca_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2446 
Symbol 
ID4599787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp2608438 
End bp2609100 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content72% 
IMG OID639777048 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_923637 
Protein GI119716672 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCATCC AGATCACCCC GAGCATCCTG AACGCCGACT TCGCCGCGCT CGGCGCCGAG 
GTCGCCCGGA TCGGCAGCGC CGACTGGGTG CACGTGGACG TGATGGACAA CCACTTCGTC 
CCTAACCTCA CGTTCGGCCC GACCATGGTC GAGGCGCTCG CCCGGTCGAC CGAGGTGCCG 
CTCGACGCCC ACCTGATGGT CGAGGTCCCC GACCGGCACG CGCTCGCGTA CGTCGAGGCC 
GGCTGCGGAT CGGTCACCTT CCACGTCGAG GCCGCGCAGG CGCCCGTCCG ACTGGCCCGC 
GAGATCCGCG CGCACGGCGC CCGGGCGAGC ATGGCGCTGC GTCCGGCCAC GCCGGTCGAG 
CCCTACGAGG ACCTGCTGCC CGAGCTCGAC ATGCTGCTGA TCATGACCGT CGAGCCCGGC 
TTCGGCGGCC AGCGGTTCCT CGACCTGTGC CTGCCGAAGA TCCGCCGGGC CCGCGAGCTG 
ATGGACAAGC ACGGGCTGGA GACCTGGCTG CAGGTCGACG GCGGCATCAG CCTGGAGACG 
ATCGAGCGCT GCGTGGACGC CGGTGCCGAC GTGTTCGTCG CCGGTTCGGC CGTCTACTCC 
GCCGCGGACC CCGACCGGAT GGTCGCCGAG CTGAGGGCCG CCGCCGAGCG CGCCGTCCGC 
TGA
 
Protein sequence
MGIQITPSIL NADFAALGAE VARIGSADWV HVDVMDNHFV PNLTFGPTMV EALARSTEVP 
LDAHLMVEVP DRHALAYVEA GCGSVTFHVE AAQAPVRLAR EIRAHGARAS MALRPATPVE 
PYEDLLPELD MLLIMTVEPG FGGQRFLDLC LPKIRRAREL MDKHGLETWL QVDGGISLET 
IERCVDAGAD VFVAGSAVYS AADPDRMVAE LRAAAERAVR