Gene Noca_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2415 
Symbol 
ID4598251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp2575100 
End bp2575540 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content73% 
IMG OID639777018 
Product3-dehydroquinate dehydratase 
Protein accessionYP_923607 
Protein GI119716642 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.491796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCACG GCCGCCGCGT GCTCGTGCTC AACGGACCGA ACCTCGGCCG GCTGGGACGG 
CGCCAGCCGG AGATCTACGG CACCACCACC CACGCCGAGC TCGCCGACCT GTGCGTCGCC 
TGGGGGCGCG ACCTCGGCCT GGATGTGGAG GTGCGCCAGA CCAACCACGA GGGCGAGCTG 
CTCGACTGGC TCAACGCCGC CGCCGACGAC GCCGAGCCGG TGGTGCTCAA CGCCGCCGCG 
TGGACGCACT ACTCCTACGC ATTGCTCGAC GCCTGCGCCC AGCTGGTCGC ACCGCTGGTC 
GAGGTGCACA TCTCCGACCC CCGCCAGCGA CCCGAGGAGT TCCGGCACAC CTCGGTGGTC 
ACGCCGTACG CCGTCGAGGT GTTCGCCGGC CACGGCATCG AGGGCTACCG GCTCGCGCTC 
GAGGCCGTCG CCCGGCGTTG A
 
Protein sequence
MSHGRRVLVL NGPNLGRLGR RQPEIYGTTT HAELADLCVA WGRDLGLDVE VRQTNHEGEL 
LDWLNAAADD AEPVVLNAAA WTHYSYALLD ACAQLVAPLV EVHISDPRQR PEEFRHTSVV 
TPYAVEVFAG HGIEGYRLAL EAVARR