| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2410 |
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| Symbol | |
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| ID | 4598246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2570706 |
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| End bp | 2571518 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 639777013 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_923602 |
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| Protein GI | 119716637 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.460251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCT GCGCCGTCCT CGGCGACCCG ATCGCGCACT CGCTGTCGCC GGTCCTGCAC
CGGGCCGGGT ACGCCGCGCT CGGGCTGGAC TGGAGCTACG AGGCCGTGCG GGTGCCGGAG
GACGGGCTCG AGGGCTTCCT GACCGGCCTC GGCCCGCAGT GGCGCGGGCT GTCGCTGACC
ATGCCGCTCA AGCGGCGCGC GCTGGCGATC GTGGCGGGCG TGACCGAGCG TGCTCGGCTG
GCCGGCGGGG TCAACACGCT GGTCCTCGAG GACGGCGCGG TCGTCCTGGC CGACAACACC
GACCTGCCGG GGGCGGTGGC CGCCGTGCGG GAGCGGTACG CCGGGCCGGT GACCGCGGGT
ACCGTCCTCG GGGGCGGTGC GACGGCCGCC GCCACCGGCC TCGCGCTGGT CGAGCTCGGC
GCCCGGCGGG TGCGCCTGCT CGCCCGCACG CCCGAACGCG CGGCGGCGGC CGCCGGGGCG
ATCGCGGCCC ACCCGGCGGC CCCCCAGGTC GAGGTCGCGA CGCTCGCGGA CGGCCCGGTG
GACGGCGAGA TCGTGGTCTC GACGATCCCG GCGGCCGCCC AGGACCCCTC GCTGGTCGCG
CGCTGCGGCG CGGTCCCGGT GGTGTTCGAG GTGGTCTACG ACCCCTGGCC GACCCCGCTC
GCCGCGTCCG CCACCGGCCG GATCCTCGTC GGCGGCCTGG ACCTGCTGGT GCACCAGGCG
GTCCTGCAGT TCGAGCTCTT CACCGGGGCA CCCGGCCCCC TGGACGCCAT GCGAGCAGCG
GGGGAGCGGG CGCTCGGGAC GGCGCCGGCG TGA
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| Protein sequence | MTRCAVLGDP IAHSLSPVLH RAGYAALGLD WSYEAVRVPE DGLEGFLTGL GPQWRGLSLT
MPLKRRALAI VAGVTERARL AGGVNTLVLE DGAVVLADNT DLPGAVAAVR ERYAGPVTAG
TVLGGGATAA ATGLALVELG ARRVRLLART PERAAAAAGA IAAHPAAPQV EVATLADGPV
DGEIVVSTIP AAAQDPSLVA RCGAVPVVFE VVYDPWPTPL AASATGRILV GGLDLLVHQA
VLQFELFTGA PGPLDAMRAA GERALGTAPA
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