| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2400 |
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| Symbol | |
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| ID | 4599500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2558738 |
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| End bp | 2560537 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639777003 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_923592 |
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| Protein GI | 119716627 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.317377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCCGC TCCAGGCGCG ACACACACCC AAGGAGAAGT TAATGGTCAA GTATCGAAAG
CGGTTGCTCG CAGCCACCGC TGCGATCGCG ATGGCGGCCA GTCTCGCCGC CTGCGGTGGC
GGCTCGGACG GCGACAGCAA CCCGGGCGGC TCGAGCAGCG AGCCGGGTGC CGAGGGCGCG
GCCGGCGGCA CGCTGTACTA CTACATCTAC GCGCCGTACG AGCACGTCGA CCCGCAGCGC
ACCTACGTCG GTGTCGAGCT GACGAACTTC CGCCGGACGA TCTACCGAAG CCTCGTGGCG
TTCCCGATCT CGACCGACGC CGAGGTGGCC AACACCCCGG TCCCCGACCT CGCGACCGAC
ACCGGCACCG ACGCTGACGG CGGCAAGACC TGGTCGTACA CGATCAAGGA CGGCGTCAAG
TGGGAGGACG GCCAGCCGAT CACGTGTGAG GACTTCAAGT ACGGCGCGTC CCGCGTGTTC
GCGACCGACG TCATCACCGG TGGCCCGAAC TACCTGCTGA GCTACCTCGA CGTCCCCACC
GACAAGGCCA CCGGGCTGCC GATCTACACC GGCCCCTACA ACTCGAGCCC CGAGGGCCAG
GCCGCGTTCG ACAAGGCGAT CACCTGCGAC GGCAACACGA TCACCTACCA CTTCAACAAG
CCGTGGCCCG ACTTCCCGCT GGCGGTCGCC GGTCTGTCGA TGATGGACCC GTACCGTCAG
GACAAGGACC AGGGCGCGAA GTCGAACTAC CAGATGTTCT CGAACGGTCC TTACCGGATC
GAGGGCAGCA CCTGGAACAA GAACAAGGGT GCGACGTTCG TCCGCAACGA GAACTACGAC
GCCTCGACCG ACTCCACCGA CATCCGCATG GCGCTGCCGG ACCAGATCGA GTTCAACGTG
GGTCAGACCA CCGAGACGAT CTACGACCAG CTGATCCAGG ACTCCGGTGA CGCTCAGTAC
GCCGTGACCA GCCAGCGCGT GCCGCCGGCC TACTACTCGC AGATCGTGGG CGACGTGGAG
AGCCGCTCGG TGCTCGTGGC CTCGCCGTAC GTCGACTACC TGGTGCCGAA CTTCCGGGTG
CTCGACAACC CCGCGGTCCG CGAGGCGCTC AAGGTCTCGA CGAACACGAC GGCGTGGATC
AACGCCGGTG GTGGCGAGAA GGCCTACGCC CCGGCCGAGT CGATCGTGAA CCCGGCCGTG
GTCGGCTACC AGGACAACCC GGCCTTCTCC GGCCCCCAGG AGGGTGACCC GGAGGCTGCG
AAGCAGATCC TCGAGGACGC CGGCGTCCAG ATGCCGTACC CGATCAAGTT CACCTACCCG
AGCTCGGAGA CCGCCGACAA GCAGGCCGCG GCGCTCAAGG AGACCTGGGA CAAGGCGGGC
TTCGACGTGA CCCTCGACGG TCTCGGCGAC ACCTACTACG ACGTCGTGCA GCAGCCCGAC
AAGGACAGCA GCGTCATGTG GGCCGGCTGG GGCTCCGACT GGCCGTCGGC CATCACCGTC
ACCCCGCCGC TGTTCGACAG CCGCCCGAAC CTGACCGCGA ACAGCGACGG CCAGGACTAC
GGCGCCTACA AGAGCGACAA GTTCAACGCT CTGGTCGACC AGGCCGCCAA CGCGGCCACG
CTGGACGAGC AGACCGCCGC CCTGCAGGAG GCCGACAAGG TCCTCGGTGA GGACGTGGCC
TACATCCCGC TGGAGATCGC GCAGTTCTTC TTCCTCCACG GGTCGAAGGT CACCGGCTAC
ACGAACACCC CCGCCTCCTC CATGTACCCG GACCTCGGTC CGATCGGCGT GGAGCAGTGA
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| Protein sequence | MPPLQARHTP KEKLMVKYRK RLLAATAAIA MAASLAACGG GSDGDSNPGG SSSEPGAEGA
AGGTLYYYIY APYEHVDPQR TYVGVELTNF RRTIYRSLVA FPISTDAEVA NTPVPDLATD
TGTDADGGKT WSYTIKDGVK WEDGQPITCE DFKYGASRVF ATDVITGGPN YLLSYLDVPT
DKATGLPIYT GPYNSSPEGQ AAFDKAITCD GNTITYHFNK PWPDFPLAVA GLSMMDPYRQ
DKDQGAKSNY QMFSNGPYRI EGSTWNKNKG ATFVRNENYD ASTDSTDIRM ALPDQIEFNV
GQTTETIYDQ LIQDSGDAQY AVTSQRVPPA YYSQIVGDVE SRSVLVASPY VDYLVPNFRV
LDNPAVREAL KVSTNTTAWI NAGGGEKAYA PAESIVNPAV VGYQDNPAFS GPQEGDPEAA
KQILEDAGVQ MPYPIKFTYP SSETADKQAA ALKETWDKAG FDVTLDGLGD TYYDVVQQPD
KDSSVMWAGW GSDWPSAITV TPPLFDSRPN LTANSDGQDY GAYKSDKFNA LVDQAANAAT
LDEQTAALQE ADKVLGEDVA YIPLEIAQFF FLHGSKVTGY TNTPASSMYP DLGPIGVEQ
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