| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2367 |
|---|
| Symbol | |
|---|
| ID | 4595985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2523835 |
|---|
| End bp | 2524659 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639776969 |
|---|
| Product | aminotransferase, class IV |
|---|
| Protein accession | YP_923559 |
|---|
| Protein GI | 119716594 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCT GGATCAACGG CCATCTCCTC CCCGATGCGA CGGCTCCGGC CGTCCCGGTC
ACCGACCACG GGCTGACCGT CGGGGATGGG GTGTTCGAGG CGGTCAAGGT CGTCGACGGA
CGGCCGTTCG CGCTCGACCG GCACCTCGAG CGGCTGCACC GCTCCGCGCA CGGGCTCGGG
CTCGCGGGCA TCGACGAGGA CGCCGTACGG CGCGGCGTCG CCGCCCTCCT CACCGGGGAG
CCGCTCGCTC TCGGCCGGCT GCGGATCACC TGCACCGGTG GGCCGGCACC GCTCGGCTCG
GGCCGCGGTG ACGCGGCGCC GACGCTGATC GTCGTGCTCG ACACGATGAC CGCCTGGCCG
GACACGACCA GCGTCGCCAC GGTGCCGTAC CCGCGCAACG AGCGCGGCGC GCTGGCCGGG
CTGAAGACGA CGTCGTACGC CGAGAACGTC GTCGCGCTGG CTGCCGCGCG CGAGCGCGGT
GCGAGCGAGG CGATCTTCGC CAACCTCGCC GGTCACCTGT GCGAGGGCAC CGGCTCGAAC
GTGTTCTACG TCCTCGACGG CGAACTGCGC ACCCCGACGC TCGCGAGCGG GTGCCTGGCG
GGTGTCACGC GGGCGCTGGT GCTGGAGTGG TACGGCGCCC GCGAGGTCGA CGAGCCGATC
GAGGTCGTCG AGCGCGCCAG CGAGGTCTTC CTCGTCTCGA CCACCCGCGA CGTGCAGGCC
GTCGCGCGCT GGGACGAGCG CGAGGTCCCC GCGCCCGGCC CGGTCACGAC CGCGGTCCGC
GAGGTGTGGC GGAGTCGGGA GCCGGAGCTG CTACTCCGCG CGTGA
|
|---|
| Protein sequence | MRAWINGHLL PDATAPAVPV TDHGLTVGDG VFEAVKVVDG RPFALDRHLE RLHRSAHGLG
LAGIDEDAVR RGVAALLTGE PLALGRLRIT CTGGPAPLGS GRGDAAPTLI VVLDTMTAWP
DTTSVATVPY PRNERGALAG LKTTSYAENV VALAAARERG ASEAIFANLA GHLCEGTGSN
VFYVLDGELR TPTLASGCLA GVTRALVLEW YGAREVDEPI EVVERASEVF LVSTTRDVQA
VARWDEREVP APGPVTTAVR EVWRSREPEL LLRA
|
|---|
| |