Gene Noca_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2332 
Symbol 
ID4595947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp2488770 
End bp2489339 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content68% 
IMG OID639776931 
Productregulatory protein, TetR 
Protein accessionYP_923524 
Protein GI119716559 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.376775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTG ATGACAGCCG CACCCGCATC CTCGACGCGG CCGAGGAGCT CTTCGCCGAG 
GACGGCTTCG ACGCGACGCC GACCGCCCGC GTGGCCGATG CCGCCAAGGT GCCCAAGGGA 
CTGGTCTTCT ACTACTTCCC ACGCAAGATC GACCTGCTGC TGACGCTGTT GCAGGAGCGG 
CTTCCGGTGC CGACGACGGA GGTAGTCAGA GGTGTCGTAC GGCGAGGTGA TCCCGCCGGG 
TCGCTGGTGG CCCTGCATCG CAGGATCGGG CTGGACAACC ACGACTCGCT GGTGTTGCGT 
ACGATCATCT TCCGCGAGAG CGGCACCCAT CCGCAGGTGC GTGACCACCT TCGTCGCTTA 
CGGCATTCGC TTGTCGAGCT CACCGAGTCC GCGCTGGACC AAGCCGTCGA GTGGACGTTG 
GCGAACACCC TCCGCCGCCA GGCCGCGGAG ACGTTCGTCT CCGTGATGCT CGACCACGCC 
AACGCGCGCA GGGCGGGTGG GGTGCCGCCG GACGTGCAGG GCGCGGCGGC CGTCGTGGCG 
TTGGCGCTGA AGGCTCCCAA GCTCGCGTGA
 
Protein sequence
MAADDSRTRI LDAAEELFAE DGFDATPTAR VADAAKVPKG LVFYYFPRKI DLLLTLLQER 
LPVPTTEVVR GVVRRGDPAG SLVALHRRIG LDNHDSLVLR TIIFRESGTH PQVRDHLRRL 
RHSLVELTES ALDQAVEWTL ANTLRRQAAE TFVSVMLDHA NARRAGGVPP DVQGAAAVVA 
LALKAPKLA