| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2318 |
|---|
| Symbol | |
|---|
| ID | 4595933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2469914 |
|---|
| End bp | 2471611 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639776917 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_923510 |
|---|
| Protein GI | 119716545 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.115468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAACC TCAGCACGGA TCTGCAAGAA CCCGTCCAGT CCGTCGCGGC GGAGCCGGTC
GAGATCCGGG TCGACGCCCG GCTGGCCGGG CCGGTCGGCG GGGTCGCGGC CGTCGTCGCC
ATCGCCTATC TCTCCCGTGC CATCGGTGGC GGCGGGTGGC TCGACTGGGC GCTCGCGCTC
GTCACGGGCG CCATCGCGGT GGCACACCTG CAGTCGCTGG CCGACTCCCG GGTGCCGCTG
CTGGTCGCCG ACGAGCAGGG CGTCCGGCTG CGGCGCGGCC GCACCTGGCG CGGCCTGCCC
TGGCAGGACA TCGAGCAGCT CGAGCACGAG CCGCGCCGGG GCCTGCTCCG CGACGGCCGG
CTGGTCCTGG TGCCCCGTGA CACCGACGCC GCGGTGCTGA CCGTCCCGCT GTCGCTCTCG
ACCCGCGTGG TCGGCGCCGA CGACGGCCTG ACGGCCGCGC TGGCGCACCT GGCCGACGAG
CCCGAGCAGG TCGTCGAGAT CGTGACGGAG GACGTCGACC GGGACGACGC GGACGACGTC
GTGGACGAAG ACCTGGCTGT CGATGCCGAG GACCTGGACG TCGAGGAGTG GGACGAGCCG
CACGACGAGC CCGGACCGGT GCACCCGCTC CTGCACGACC CGCGTCCGGC AGTCGCTCGC
GGCATCGAGT CCCTGGCGGC CCGGCTGCGG TTGACGCCCC GCCCCGCCGA GGACCCCGTC
GAGCCCGAGC CGACGATGCC CGAGCAGGCG GGACCCGAGC CGACGGTGCC GCTGCCGCTC
GTGACCAGTC CCACCCAGAG CCCACTACGG GAGCCGGTGC CCGCGGTCCG CTCCGAGATC
CGGTTCGACG GTGCCGCCGC GTTCGCGCTG GACCCGGCTG AGGACGCCAC CAGGGTCGAC
GCCCGCCTCC CGGAGGCCGG TGAGCTGCAC CGCTCCGAGG GTCTCCTGAT CGACGACCTC
GTCCTGGAGC AGGGCGCGGT GCTGCCCGCC GCCGACCCCG TCGTCGGCCC CGAGCTCGCC
GCGGCCCGGA CCCGGCTGTC CCTCACCGTC GACCAGCTCG CGGAGCGCAC CCGGATCCGG
CCGCACGTCA TCGAGTCCAT CGAGGTCGAC GACTTCGCTC CCTGCGGCGG CGACTTCTAC
GCCCGCGGCC ACCTGCGCAC CCTCGCCCGG GTCCTCGGCG TCGACGCGGC ACCGCTGCTG
GCGGCGTACG ACGAGCGCTA TGCCGATGCG CCGATCGACG CCCGGCGGGT GCTCCAGGCC
GAGCTCGCGA CCGGGGTCGA CGGCCCGATC CGCAGCACCC GCGGCGGGCC GAACTGGTCG
GTGCTGGTCG CCGCGGTGAT GGCGATCGTG CTGGCCTGGT CGATCGCCCG GCTGGCCCTG
GACAGCCCGG TCGAGCTCGA CCGCAAGCCC GTGCTCAACG GGTCCCCGTC GTCGGTCGGC
AAGCTCGGGC CGGCGGTGCC CGTCCTCCTG GAGGCCTCCG CCGGCGGCGC CCACGTCGTC
GTCCGGGACG GCGCGGGTGA GGTCGTCTAC AGCGGCGACC TGGCCTACGG CCAGTCGAAG
ACGGTCAAGG CGTCCCCACC GGTGCGGGTC CAGTCCTCCG ACGGTGCGCT CCACGTGACC
GTCGACGGGC AGGACCGGGG GCCGCTGGGT GCCGACGGGC AGCCCGCGCA GAACACCTTC
GCGGCCGCGA CCGAGTGA
|
|---|
| Protein sequence | MSNLSTDLQE PVQSVAAEPV EIRVDARLAG PVGGVAAVVA IAYLSRAIGG GGWLDWALAL
VTGAIAVAHL QSLADSRVPL LVADEQGVRL RRGRTWRGLP WQDIEQLEHE PRRGLLRDGR
LVLVPRDTDA AVLTVPLSLS TRVVGADDGL TAALAHLADE PEQVVEIVTE DVDRDDADDV
VDEDLAVDAE DLDVEEWDEP HDEPGPVHPL LHDPRPAVAR GIESLAARLR LTPRPAEDPV
EPEPTMPEQA GPEPTVPLPL VTSPTQSPLR EPVPAVRSEI RFDGAAAFAL DPAEDATRVD
ARLPEAGELH RSEGLLIDDL VLEQGAVLPA ADPVVGPELA AARTRLSLTV DQLAERTRIR
PHVIESIEVD DFAPCGGDFY ARGHLRTLAR VLGVDAAPLL AAYDERYADA PIDARRVLQA
ELATGVDGPI RSTRGGPNWS VLVAAVMAIV LAWSIARLAL DSPVELDRKP VLNGSPSSVG
KLGPAVPVLL EASAGGAHVV VRDGAGEVVY SGDLAYGQSK TVKASPPVRV QSSDGALHVT
VDGQDRGPLG ADGQPAQNTF AAATE
|
|---|
| |