Gene Noca_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2258 
Symbol 
ID4597804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2409187 
End bp2410191 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID639776857 
Producthypothetical protein 
Protein accessionYP_923450 
Protein GI119716485 
COG category 
COG ID 
TIGRFAM ID[TIGR03299] phage/plasmid-related protein TIGR03299 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.369604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCACG AGATCGAGAC CCACGGCACG CAGGCAGCAG CCGTCTTCGC CCGCAAGGAC 
GCCTGGCACC GCCTGGGCAC CACCGTCCGC GACCGCGCGT TCACCGCCGA GGAGGCCATG
CGGCTCGGCC ACCTGGGCGG CTGGTACGTC CGCAAGTTGC CGCTCACCAC CGCCGAGGTC
AGCGAGGTCG GCGTCACCGC GATCGAGGTC CCCGGCTTCG CCACGGTGCG CACCAACCCG
TTCACCGGGG CACCCGAGGC GCTCGGCGTC GTCGGCGGCG GCTACACCCC GCTGCAGAAC
GAGGACCACG CCGAGTTCCT GAACCTGCTG GCCGAGGAGT CGGGCGCGAT CTTCGACACC
GCCGGTTCGC TGCGCGGCGG TCGGCAGGTG TTCATCACCA TGCAGCTGCC GGACTCGCTC
ACGGTCGGCG GCACCGACCG CGTCGACCTG AACATCGCGG CGCTCAACAG TCACGACGGC
TCCAGCGCGT TCCGCATCCT CGTCACCCCG GTCCGCGTCG TGTGCGCGAA CACCCAGAGC
GCGGCCCTGC GCAACCACGA GTCGTCGTTC TCGATCCGGC ACACCCGCAA CGCCAAGGCC
GCCGTCCAGG CCGCCCGCGA CGCGCTCGGG CTGACGTTCA CCTACGTCGA CGCGTTCCAG
GTCGAGGCCG AGCGGCTGAT CCAGCAGACC ATGACCGACG CTGCGTTCGA CGCCCTGATC
GACGCCACGT TCGGCAAGGC CGAGGCCAAC GGCACCAAGC GGGTCCGCGA GACCGAGCGC
CGCCGCCGCT CCCGGCTGCA CTGGCTGTTC GCCGACGCCG ACACGCAGGC CGGCATCCGC
GCCACGGCGT GGGCCGGCTA CCAGGCCGTG GCCGAGTACG TCGACCACTA CGCCCCGGTC
CGCACCAAGG GCGACGAGCA CGCCGCCCGG GCCACGCGGG TGCTCACCAG CGACGACCCC
GACCGGATCA AGCGACGCGC CTGGACCGCG CTCGCTCCGG CCTGA
 
Protein sequence
MAHEIETHGT QAAAVFARKD AWHRLGTTVR DRAFTAEEAM RLGHLGGWYV RKLPLTTAEV 
SEVGVTAIEV PGFATVRTNP FTGAPEALGV VGGGYTPLQN EDHAEFLNLL AEESGAIFDT
AGSLRGGRQV FITMQLPDSL TVGGTDRVDL NIAALNSHDG SSAFRILVTP VRVVCANTQS
AALRNHESSF SIRHTRNAKA AVQAARDALG LTFTYVDAFQ VEAERLIQQT MTDAAFDALI
DATFGKAEAN GTKRVRETER RRRSRLHWLF ADADTQAGIR ATAWAGYQAV AEYVDHYAPV
RTKGDEHAAR ATRVLTSDDP DRIKRRAWTA LAPA