Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2224 |
Symbol | |
ID | 4598722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2371632 |
End bp | 2372543 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639776824 |
Product | type II secretion system protein |
Protein accession | YP_923417 |
Protein GI | 119716452 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCT TGCAGATCGC GCTCGCCAGC GGCACCCTCA TCGGACTGGC CCTCGCCCTG CTCGTATGGC GCATCGCGCC CTCCGACCCC GACCTGGTCG ACGCGCTGGA CCGTCTCTCA CCTGACCACG TCGTGCCCCG CCGCAACACT CCCGGCCTCG ACGTCGACAC CGGCACCGGC TCGGCGGTCG ATCGGATCGG CTTGTGGGCG ATGAAGAACC TGCCCGGCGG CGCCTGGGCC CACACGCCTC GCAAGGACCT GGCCATCCTG CAGATCAGCG AGACCCGGTT CTACGGCGAG AAGGTCGTCT GGGCTGCGCT CGGCCTGATC ATGCCGCCGC TGCTGGCCGC CTTCTTCACT CTGATCGGCC TTCCGCTGCC GTTCGCCATT CCGACGCTCG GCTCGCTGGC CCTGGCAGCC CTGTTCTGGT TCATGCCCAA CTACAACGCC GCCGACGATG CCAAGAAGGC CCGCATCGAG TTCAGCCGCG CCCTGGGCGC CTACATCGAC ATGGTGGCCA CCGGCGTCCG CGACGGATCC AGCGGCCAGC AGGCGCTGCG CTCGGCAGCC GAGGTCGGCG ACAAGTGGGT CTTCAAGCGG ATCGAGAGCG AGCTGCGCCG CGCCCGCTAC ATGACCCGCG CACCCTGGGA CTCCCTGCAC GGTCTCGCCG ACGAGCTCGC CGTCCCCGAG CTCGATGACC TCGCCGACAT CATGCAGCAG TCCGGCCAGG ACGGAGCCCA GATCTACAAC AACCTCCGGG CCCGCGCCGC CGCACTCCGC TCGGCGATGC TCAGCGCCGA GGTCGGCAAG GCCAACGCCA CCTCCGAGCG CATGTACATC CCAGCCAGCC TGCTCGGCAT CGTCTTCATG GCGATCCTCG TCACCCCCTC CCTGCTCCGC TTCACCACCT GA
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Protein sequence | MTGLQIALAS GTLIGLALAL LVWRIAPSDP DLVDALDRLS PDHVVPRRNT PGLDVDTGTG SAVDRIGLWA MKNLPGGAWA HTPRKDLAIL QISETRFYGE KVVWAALGLI MPPLLAAFFT LIGLPLPFAI PTLGSLALAA LFWFMPNYNA ADDAKKARIE FSRALGAYID MVATGVRDGS SGQQALRSAA EVGDKWVFKR IESELRRARY MTRAPWDSLH GLADELAVPE LDDLADIMQQ SGQDGAQIYN NLRARAAALR SAMLSAEVGK ANATSERMYI PASLLGIVFM AILVTPSLLR FTT
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