Gene Noca_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2224 
Symbol 
ID4598722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2371632 
End bp2372543 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID639776824 
Producttype II secretion system protein 
Protein accessionYP_923417 
Protein GI119716452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCT TGCAGATCGC GCTCGCCAGC GGCACCCTCA TCGGACTGGC CCTCGCCCTG 
CTCGTATGGC GCATCGCGCC CTCCGACCCC GACCTGGTCG ACGCGCTGGA CCGTCTCTCA
CCTGACCACG TCGTGCCCCG CCGCAACACT CCCGGCCTCG ACGTCGACAC CGGCACCGGC
TCGGCGGTCG ATCGGATCGG CTTGTGGGCG ATGAAGAACC TGCCCGGCGG CGCCTGGGCC
CACACGCCTC GCAAGGACCT GGCCATCCTG CAGATCAGCG AGACCCGGTT CTACGGCGAG
AAGGTCGTCT GGGCTGCGCT CGGCCTGATC ATGCCGCCGC TGCTGGCCGC CTTCTTCACT
CTGATCGGCC TTCCGCTGCC GTTCGCCATT CCGACGCTCG GCTCGCTGGC CCTGGCAGCC
CTGTTCTGGT TCATGCCCAA CTACAACGCC GCCGACGATG CCAAGAAGGC CCGCATCGAG
TTCAGCCGCG CCCTGGGCGC CTACATCGAC ATGGTGGCCA CCGGCGTCCG CGACGGATCC
AGCGGCCAGC AGGCGCTGCG CTCGGCAGCC GAGGTCGGCG ACAAGTGGGT CTTCAAGCGG
ATCGAGAGCG AGCTGCGCCG CGCCCGCTAC ATGACCCGCG CACCCTGGGA CTCCCTGCAC
GGTCTCGCCG ACGAGCTCGC CGTCCCCGAG CTCGATGACC TCGCCGACAT CATGCAGCAG
TCCGGCCAGG ACGGAGCCCA GATCTACAAC AACCTCCGGG CCCGCGCCGC CGCACTCCGC
TCGGCGATGC TCAGCGCCGA GGTCGGCAAG GCCAACGCCA CCTCCGAGCG CATGTACATC
CCAGCCAGCC TGCTCGGCAT CGTCTTCATG GCGATCCTCG TCACCCCCTC CCTGCTCCGC
TTCACCACCT GA
 
Protein sequence
MTGLQIALAS GTLIGLALAL LVWRIAPSDP DLVDALDRLS PDHVVPRRNT PGLDVDTGTG 
SAVDRIGLWA MKNLPGGAWA HTPRKDLAIL QISETRFYGE KVVWAALGLI MPPLLAAFFT
LIGLPLPFAI PTLGSLALAA LFWFMPNYNA ADDAKKARIE FSRALGAYID MVATGVRDGS
SGQQALRSAA EVGDKWVFKR IESELRRARY MTRAPWDSLH GLADELAVPE LDDLADIMQQ
SGQDGAQIYN NLRARAAALR SAMLSAEVGK ANATSERMYI PASLLGIVFM AILVTPSLLR
FTT