| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2223 |
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| Symbol | |
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| ID | 4598721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2370703 |
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| End bp | 2371635 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639776823 |
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| Product | type II secretion system protein |
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| Protein accession | YP_923416 |
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| Protein GI | 119716451 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTG CGTTCCTGCC CGCCGTCTTC GGTGCGCTCA TCGTCATCGG TCTGATCGGG
ATGGTCTACG CGCTAATCCC CGCGCCGCCG GAGCCGCCGC GGCCCGCCCG GACCGTCACC
CCGTTCGGGC GGCTGGGGAA CTGGTTCGTC CGGCTCGACC GGCGCACCCG GATGCTGATG
GTCGGCGGTG CCATGGCTGG CCTCCTGGTC GCGCTGGTGA CCGGCTGGGT GATCGCGATC
GTGCTCGTCC CGGCCGGGAT CGTCGGTATC CCGCTGTTGC TGACGCCCCC GCCGGCGGCC
GCGAGCATCG AGAAGCTCGA GGCGCTCGAG GAGTGGACGC GGTCCCTGTC GGGCAAGCTG
ACCGCCGGCC AGTCCCTGCG CTCGGCGCTC ATTAAGTCCC TGCAGTCCGC GCCGGCGCCG
ATCGAGCGCG AGGTCGGACT GATGGTCTCC CGGTTGTGGA ACAACACCGC CAGCACCGAG
GACGTGCTGC GCGCCTTCGC CGAGGACCTC AACGACTCCA CCGGCGACGT CGTCGCCAGC
CAGCTGATCC TTGCCGCCAG CGGCCGCGGC CAGGCCGGAC TGTCGAAGGC CTTGGACGCC
CTCGCTGAGA CCGTCGCCTC CGACGTGCGC GCTCGCCGCC AGATTGCCGC CGACCAGGCC
AAGCCCCGCA CCACCGCCCG CACCGTCACC GTGATCACCC TCGGTGTGCT GGGCATGCTC
GCCTTCACCG GGGACTACAT CGAGCCCTAC GGGTCCCCGC TGGGCCAGGT CATCCTCGCC
GTCCTGCTCT CGGCCTACGT GGCCACGCTG CTGTGGATGC GCCGGATGGC TGTCGCCAAG
CCGCTCCCGC GGTTCCTCGA CCTCCAGGCC CGCAACGCCC ACCGCGCCGC CCAGCGCACG
GCACCGGGCG AGAAGGAAGG AGCGCTCGCA TGA
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| Protein sequence | MSTAFLPAVF GALIVIGLIG MVYALIPAPP EPPRPARTVT PFGRLGNWFV RLDRRTRMLM
VGGAMAGLLV ALVTGWVIAI VLVPAGIVGI PLLLTPPPAA ASIEKLEALE EWTRSLSGKL
TAGQSLRSAL IKSLQSAPAP IEREVGLMVS RLWNNTASTE DVLRAFAEDL NDSTGDVVAS
QLILAASGRG QAGLSKALDA LAETVASDVR ARRQIAADQA KPRTTARTVT VITLGVLGML
AFTGDYIEPY GSPLGQVILA VLLSAYVATL LWMRRMAVAK PLPRFLDLQA RNAHRAAQRT
APGEKEGALA
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