Gene Noca_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2206 
Symbol 
ID4599113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2355476 
End bp2355997 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content70% 
IMG OID639776807 
Productlipoprotein signal peptidase 
Protein accessionYP_923400 
Protein GI119716435 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.759642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGACTG GTCGTGTCGT AGTCCTGTTG GCGGCGGCCA CGGTTGCTGG GATCGACCTG 
ACCGCGAAGG CGGTATCCGA GGTCCAGCTG GCCAACTCTT CGGTCGATCT CGGGCTACTG
CAGCTCAAAT TGGCCCACAA CTCCGGCGTC GCGTTCAGCA TGGGCGACCG ACTTCCGGTG
GGCGTGATCG TGGCCATCAC CGCGGCCATC GCCGTCACCC TGGCCGTGTA CGCGTGGCGC
AGGGCCCCGC ACGCCGGGTG GGTCGAGCGG ATCGCCGGCG GAGCGGTCAT CGGCGGCGCC
CTCGCCAACG TGGTCGACCG CGCCCGCGAC GGCGTGGTCA CCGACTACCT GCACACCGGC
TGGTGGCCCA CGTTCAACCT CGCCGACACA TTCCTGGTCA CCGGGTTCGT CGTGATCGCC
GTGCTGCACG CCCGCCCAGA ACGCACCAAG GAGACGGCTG CGGCGCCGGC GAAAAACCAC
ACCGCCGCCC GGCCGGTCAC GAACGACCCT CCACGGACAT AG
 
Protein sequence
MRTGRVVVLL AAATVAGIDL TAKAVSEVQL ANSSVDLGLL QLKLAHNSGV AFSMGDRLPV 
GVIVAITAAI AVTLAVYAWR RAPHAGWVER IAGGAVIGGA LANVVDRARD GVVTDYLHTG
WWPTFNLADT FLVTGFVVIA VLHARPERTK ETAAAPAKNH TAARPVTNDP PRT