| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2201 |
|---|
| Symbol | |
|---|
| ID | 4599108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 2350081 |
|---|
| End bp | 2351679 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639776802 |
|---|
| Product | ResB family protein |
|---|
| Protein accession | YP_923395 |
|---|
| Protein GI | 119716430 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGACG TCAAGACGAA GGCAACGGAA GCCGCCCCAG CAGGCACGGC GCAGGCGCCG
CCGTCGTGGG GGTGGCTGCG CTGGGCGTGG CGCACCCTGA CGTCGATGCG TACCGCGGTG
GTCCTGCTCG GTCTGCTCGC GCTTGCCGCG ATCCCGGGGT CGGTCTTTCC GCAGCGCAAT
GTGGCCACCG ATCCGGCCGC GGTGCAGCAG TACGTCCTTG AGCATCCCCG ACTCGCGCCG
TGGCTGGACC GGCTCGGGAT GTTCGACGTC TACGCGTCCT CGTGGTTCGC CGCCATCTAC
GTGCTGCTGC TGGTTTCCAT GACCGGGTGC GTGCTGCCCC GATCCCGTCG ACTCTGGCAG
TCCGCGCGGA GCGCTCCCCC AGCTGCCCCA CGGAACCTGG CCCGCTTCGA GAGCCACCGC
GCCTGGGAAA CCACACGTGA GCCGGCCGAG GTCATCGCCA CCGCCGCGGC GCACCTGCGC
CGCGGCCGGT TCCGCGTCGT CGCCTCCCGT GATGAAGTCC GGGCCGAGCG CGGCTACCTG
CGCGAGGTCG GCAACCTCGC CTTCCACCTG TCGCTGCTGG TGCTCCTGGT TGGCATCGCC
GCCGGCAAGC TGGTCGGGTT CGAGGGCCGG GTGGCGGTCA CCGAGGGCGG AACCTTCGCC
AATGACCTCT CCCAGTACGA CGCCTTCTCC CCCTCGGCGT GGACCGACGT GGACGACCTG
GAGCCGTTGG CCTTCCGCCT GGAGGAGTTC GACGTCTCGT ACCAGACCAG CGGACGCAAC
CTCGGTCAGC CCTCACAGTT CGCCGCCCGG CTCGCCTACC GCGCCGGGGG CGGTGAGGAG
CAGACCGTCA CAGTCGAGCC CAACCACCCG CTCGACGTCA ACGAGACGAA GTTCTTCCTC
ACGGGCAACG GATACGCCCC CGTTGTCACC GTGCGCGACG GGCGTGGCAA GGCCGTGTTC
ACCGGACCGG TGCAGTTCTT GCCGCTGGAC ACCAGCTACG CCTCCGACGG CGTGATCAAG
GCGCCGGACG CCCAGCCCAC CCAGCTCGCC TTCGAGGGCT TCTTCCTGCC CACCGCCGAC
GTCGGCCCGC AAGGCCCCTA CTCGATGTTC CCCGACACCC TGAACCCCCA ACTGTTCCTC
ACCGCTTACA CCGGCGACCT CGGGTTCGCC GACGGCGTCC CGCAGTCGGT GTTCACCCTC
GACAAGGACG AGCTCACCCA GGTGCGCCGC AACGGGAAGC CCTTCAGCCA GGCTCTGTCC
GTCGGTGAGA CCATGCGGCT TCCCGGCGGT CAAGGCAGCC TCACCTTCGA CGGCGTGTCC
CGGTTCGCCA ACTTCCAGAT CGCCTACGAC CCCGGCAAGG AGATCACCCT CGCCGCCGCG
GTCGTCCTCC TCGTCGGCCT CACCGCCTCA CTGGCCATCC GCCGCCGCCG GCTGTGGCTG
CGGGTTCGCC CCACCGAGGA CGGCGGGGCC CTTGTCGAGG TCGCCGGCTA CTCCCTGACC
CGCCGTGAAC CTCCCCCCGA CGAGATCCAG GACCTCGTCG CCGCGCTGCA CGGCCCGGAC
CACCCCTCCA TTACCGCTAG CAAGGACGCC TCCGCATGA
|
|---|
| Protein sequence | MTDVKTKATE AAPAGTAQAP PSWGWLRWAW RTLTSMRTAV VLLGLLALAA IPGSVFPQRN
VATDPAAVQQ YVLEHPRLAP WLDRLGMFDV YASSWFAAIY VLLLVSMTGC VLPRSRRLWQ
SARSAPPAAP RNLARFESHR AWETTREPAE VIATAAAHLR RGRFRVVASR DEVRAERGYL
REVGNLAFHL SLLVLLVGIA AGKLVGFEGR VAVTEGGTFA NDLSQYDAFS PSAWTDVDDL
EPLAFRLEEF DVSYQTSGRN LGQPSQFAAR LAYRAGGGEE QTVTVEPNHP LDVNETKFFL
TGNGYAPVVT VRDGRGKAVF TGPVQFLPLD TSYASDGVIK APDAQPTQLA FEGFFLPTAD
VGPQGPYSMF PDTLNPQLFL TAYTGDLGFA DGVPQSVFTL DKDELTQVRR NGKPFSQALS
VGETMRLPGG QGSLTFDGVS RFANFQIAYD PGKEITLAAA VVLLVGLTAS LAIRRRRLWL
RVRPTEDGGA LVEVAGYSLT RREPPPDEIQ DLVAALHGPD HPSITASKDA SA
|
|---|
| |