Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2164 |
Symbol | |
ID | 4599224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2316611 |
End bp | 2317240 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639776767 |
Product | regulatory protein, TetR |
Protein accession | YP_923360 |
Protein GI | 119716395 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAGC TGCCGGCGAA GCTGGCCAGT CAGCTGTACG GCGCGGCCGA GTTGATCGCG GAGCGCGGTC TGGATGGCAC CAAGATCGAG GACATCGCCG AGGCCACGGG CATTCCCAAG GCCACGATCT ACTACCACCT CGATGGCAAG AACGCCGTCC TGGAGTTCCT CCTCACCGAC CTGCTGGAGA TGATCGCTGG GGCCGTCGGT GTTGCGGTGT CGAGCGCTGA GGACGCGCGG ACCCGTCTCG AGGCGGCAGT CGCCGCGCAG TTGGGCGTGA TGCTCGCGCA CCCGTTCCTG TGCCGGGCGC TGGTGGGCGA CCTCGGTCGG GCCACCCGGC TGCCTGACCT GGCGGTGGCG TTGCGCAGCG CGTTCTACGA GCCGATCGAG AAGCTGCTGG CCGACGGCGT CGCCGACGGG TCGCTGCGCC AGGTCGCCGA TCCGGGCGCC GTGGCCCTGA GCGTCTTCGG CGCCATCACC GTCGCCGGCC TCAGTGCAGC GGTCGAGGGG CCGTCCGCCG ATCCGTCCGC CGACGCAGCG CGCTTCTCCG CCGCGGTCGG CGAACTCATC CTCGACGGCC TCGCCACGCC TCGCCCGCGC GGTGGCCACG AATCGGACGA GCGGCCGTGA
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Protein sequence | MRKLPAKLAS QLYGAAELIA ERGLDGTKIE DIAEATGIPK ATIYYHLDGK NAVLEFLLTD LLEMIAGAVG VAVSSAEDAR TRLEAAVAAQ LGVMLAHPFL CRALVGDLGR ATRLPDLAVA LRSAFYEPIE KLLADGVADG SLRQVADPGA VALSVFGAIT VAGLSAAVEG PSADPSADAA RFSAAVGELI LDGLATPRPR GGHESDERP
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