| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2159 |
|---|
| Symbol | |
|---|
| ID | 4599219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2308711 |
|---|
| End bp | 2309637 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639776762 |
|---|
| Product | 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_923355 |
|---|
| Protein GI | 119716390 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGCA TCGCATTCAT TGGACTCGGC AACATGGGCA ACTCGATGGC GAAGAACCTG
ATCGCCGCCG GGTTCGACGT GGTTGGGTTC GACGCCGACT CTCGTACGAA CCAGCGTTCG
GCCGAGACAG GCATCCCAGT CGCCGCGGAC GTTGTGGACG CCGTCACCGG CGCAGACGTT
GTGATCACGA TGCTCCCCAA TGGCGACATC CTTCGCCAGG TGCTGCTGGG CGCTGGCGCC
GAATCTGGCG TCTTGAACTA CCTCGCACCG GGGGCGCTCG TCATCGACTC ATCCTCGATC
GACGTCGCCA ACTGTTTGGC GGTACACGAG AGCGCGGCCT CGGCGGGCAT CGCCTTCCTC
GACGCTCCGG TCTCCGGCGG GGTCGGAGGC GCTGCGGCAG GGACCCTCAC CTTTATGGTG
GGTGGGGACG AAGCACACGT GAGGCGAGCC TGGCCGCTCT TCGAGGCCAT GGGCAAGAAG
GTCGTTCGAG TCGGCGGACC GTCGACCGGA CAAGCCGTCA AGATGTGCAA TCAGATGATC
TACGCCTCGT CGCTCGTCGC GGTTGCAGAA GCCTTCTCTC TCGCCGACAA ACTCGGTGTC
GCACCGAAGA TGCTGTTCGA GGTAGTCACG AGCTCCTCAG GAGACTGTTG GGCCATCCGC
AACTCCTGCC CCTGGCCCGA TGTTGTCGAA GGAGGATCAG CAGCCGACGA AGGCTTCGCC
CCACGCTTCT CCTCGCGGCT AATGAGCAAG GATCTTCGAC TGGCTACCTC CGCAGCCTCG
AACGTTGGCC AGCCTCTGCC TCTGACGGGC AAGACTGTGA CGTTCTACGA GAAGGTCGCC
GTACATGAGC CGGCACTTGA TGTCACTGCC GTGATCCGCG AGATCAATGA AGCCGGCGCG
TCTACTGCGA CTGTAGTCAC CCGATGA
|
|---|
| Protein sequence | MERIAFIGLG NMGNSMAKNL IAAGFDVVGF DADSRTNQRS AETGIPVAAD VVDAVTGADV
VITMLPNGDI LRQVLLGAGA ESGVLNYLAP GALVIDSSSI DVANCLAVHE SAASAGIAFL
DAPVSGGVGG AAAGTLTFMV GGDEAHVRRA WPLFEAMGKK VVRVGGPSTG QAVKMCNQMI
YASSLVAVAE AFSLADKLGV APKMLFEVVT SSSGDCWAIR NSCPWPDVVE GGSAADEGFA
PRFSSRLMSK DLRLATSAAS NVGQPLPLTG KTVTFYEKVA VHEPALDVTA VIREINEAGA
STATVVTR
|
|---|
| |