| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2120 |
|---|
| Symbol | |
|---|
| ID | 4599964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2267364 |
|---|
| End bp | 2268464 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639776723 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_923316 |
|---|
| Protein GI | 119716351 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA CCGCTGCCGT TTCCCGTGAG AAGGGCGCGC CGCTCGTCGT CGAGGAGCTG
GAGCTGGATG CGCCACGCTC CACCGAGGTG CGCGTGCGAA TGGTGGGTTC CGGGATCTGC
CACACCGACG CTGTTGCCCG GGACCGCATC TACCCGGTGC CCGAGCCGTC GGTCTTCGGA
CACGAGGGGT CTGGCGTCGT CGAGGAGGTC GGCTCCGATG TGCGTGGCGT GCAGGTGGGG
GACCACGTCG TGCTGGGCCC GTCGTACTGC GGCAAGTGCA CCTTCTGCCG AAGCGGTGAG
CCGATGTACT GCGAGAACGG CTTCCCCGAG CTGTTCGGTT GTCGTCGGCA CGATGGGACC
ACGGCCTTCA GCAAGGATGG CGAGATGGTC GGCTCCCACT TTTTCGGGCA GTCGTCGTTC
GCGACCCACG CCAACGTCAC CGAGAACAGC GTCATCGTCG TCGACAAGGA CGCCCCGCTG
GAGCTGCTCG GCCCACTGGG ATGCGGGCTC AACACCGGTG CGGGGGCCGT GCTCAACGAG
ATGCGGCCGG CGGCCGGGTC CTCGATTGTC GTCTTCGGTA CCGGAGCGGT CGGCTTCGCC
GCGCTCATGG CGGCAGCCGC GGTGTCGTGC TCCACGATCA TCGGCGTCGA CATCCACGAC
TCCCGTCTGG AGCTGGCCCG GGAGCTGGGC GCGACGCACA CCATCAACTC CTCGTCCCAG
GACCTGCATG CCGAGCTGGA GAAGATCACC GGCGGGCGGG GCGTGAACTA CGCACTGGAC
ACCACCGCGA GGTCAAGCGT GGTTCGGGAC GCTGCCGATG CGCTCGGCAA GCGGGGTGTG
CTCATCGCGG TCGGCGCGGC CGCGCCCGGC GATGAGGTCA GCTTCGAGGT CGGCAACTCT
CTGGTCAAGG GCTGGACCTT CAAGACCGTG ATCGAGGGGT CGGCAGTGCC GCAGGTGTTC
ATCCCGCGCC TGGTCGACCT GTGGAAGCAG GGCAAGTTCC CCTTCGACAA GCTGGTGAAG
ACCTACTCCC TGCATGACAT CAACACCGGC TTCGAGGACT CCGCCTCCGG GGCCGTCATC
AAGCCCGTGG TTGCCTACTG A
|
|---|
| Protein sequence | MTVTAAVSRE KGAPLVVEEL ELDAPRSTEV RVRMVGSGIC HTDAVARDRI YPVPEPSVFG
HEGSGVVEEV GSDVRGVQVG DHVVLGPSYC GKCTFCRSGE PMYCENGFPE LFGCRRHDGT
TAFSKDGEMV GSHFFGQSSF ATHANVTENS VIVVDKDAPL ELLGPLGCGL NTGAGAVLNE
MRPAAGSSIV VFGTGAVGFA ALMAAAAVSC STIIGVDIHD SRLELARELG ATHTINSSSQ
DLHAELEKIT GGRGVNYALD TTARSSVVRD AADALGKRGV LIAVGAAAPG DEVSFEVGNS
LVKGWTFKTV IEGSAVPQVF IPRLVDLWKQ GKFPFDKLVK TYSLHDINTG FEDSASGAVI
KPVVAY
|
|---|
| |