Gene Noca_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2110 
Symbol 
ID4599954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2255641 
End bp2256351 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content73% 
IMG OID639776713 
ProductABC transporter related 
Protein accessionYP_923306 
Protein GI119716341 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGC TCCTGGAGGT CCGCGACCTC GTCGTCGGCT ACGGCCCGCA CCCCGTGTTG 
CACGGCATCG ACTTCGAGGT CCACGAGGGC GAGGTCTGCG TGCTACTCGG GCTCAACGGC
GCCGGCAAGA CGACGACCGT GTCCACGATC GCCGGTCTCC TGCGCTCGCA GTCGGGAGAG
GTCCGCTTCG ACGGACGGTC CCTGGGCCGC CGCGCGCCGT CGACCCGGGT GCGCCAGGGG
ATCTCCCTCT GCCCGGAGGG GCGCCGGGTG TTCCCCAAGC TGAGCGTGCG GCAGAACCTG
CGCCTGGGCG CCTGGAGCCG ACGCCGGTCG CCGCGCACCG TGCGGGAGCA GCTCGACCTG
GTGCTCGACT ACTTCCCGCG GCTGGCCGAG CGCGCGGACC AGGGAGCCGG GACCCTGTCC
GGCGGCGAGC AGCAGATGCT GGCGGTGGGA CGGGCCGTGA TGTCGCGCCC GCGGCTGCTG
CTGATCGACG AGGCGTCGCT CGGGCTCAGC CCCACCCTGG CCCGCACGGT CTGGGAGGTC
ACCTCCCGGA TCAGGGCCGA CGGCACCACG GTGCTGATGG TCGAGCAGAA CGCCGGAGCC
CTGCCGTTCG CCGACCGCGC CCTGGTCATG GAGAAGGGCA CCCTCGTCCA CACCGCCGTG
GGTGACGAGA TCCGCAACGT CGACCTCCGT GAGGCCTACC TCGGAGCTTA G
 
Protein sequence
MTALLEVRDL VVGYGPHPVL HGIDFEVHEG EVCVLLGLNG AGKTTTVSTI AGLLRSQSGE 
VRFDGRSLGR RAPSTRVRQG ISLCPEGRRV FPKLSVRQNL RLGAWSRRRS PRTVREQLDL
VLDYFPRLAE RADQGAGTLS GGEQQMLAVG RAVMSRPRLL LIDEASLGLS PTLARTVWEV
TSRIRADGTT VLMVEQNAGA LPFADRALVM EKGTLVHTAV GDEIRNVDLR EAYLGA