Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2110 |
Symbol | |
ID | 4599954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2255641 |
End bp | 2256351 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639776713 |
Product | ABC transporter related |
Protein accession | YP_923306 |
Protein GI | 119716341 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCGC TCCTGGAGGT CCGCGACCTC GTCGTCGGCT ACGGCCCGCA CCCCGTGTTG CACGGCATCG ACTTCGAGGT CCACGAGGGC GAGGTCTGCG TGCTACTCGG GCTCAACGGC GCCGGCAAGA CGACGACCGT GTCCACGATC GCCGGTCTCC TGCGCTCGCA GTCGGGAGAG GTCCGCTTCG ACGGACGGTC CCTGGGCCGC CGCGCGCCGT CGACCCGGGT GCGCCAGGGG ATCTCCCTCT GCCCGGAGGG GCGCCGGGTG TTCCCCAAGC TGAGCGTGCG GCAGAACCTG CGCCTGGGCG CCTGGAGCCG ACGCCGGTCG CCGCGCACCG TGCGGGAGCA GCTCGACCTG GTGCTCGACT ACTTCCCGCG GCTGGCCGAG CGCGCGGACC AGGGAGCCGG GACCCTGTCC GGCGGCGAGC AGCAGATGCT GGCGGTGGGA CGGGCCGTGA TGTCGCGCCC GCGGCTGCTG CTGATCGACG AGGCGTCGCT CGGGCTCAGC CCCACCCTGG CCCGCACGGT CTGGGAGGTC ACCTCCCGGA TCAGGGCCGA CGGCACCACG GTGCTGATGG TCGAGCAGAA CGCCGGAGCC CTGCCGTTCG CCGACCGCGC CCTGGTCATG GAGAAGGGCA CCCTCGTCCA CACCGCCGTG GGTGACGAGA TCCGCAACGT CGACCTCCGT GAGGCCTACC TCGGAGCTTA G
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Protein sequence | MTALLEVRDL VVGYGPHPVL HGIDFEVHEG EVCVLLGLNG AGKTTTVSTI AGLLRSQSGE VRFDGRSLGR RAPSTRVRQG ISLCPEGRRV FPKLSVRQNL RLGAWSRRRS PRTVREQLDL VLDYFPRLAE RADQGAGTLS GGEQQMLAVG RAVMSRPRLL LIDEASLGLS PTLARTVWEV TSRIRADGTT VLMVEQNAGA LPFADRALVM EKGTLVHTAV GDEIRNVDLR EAYLGA
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