Gene Noca_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2106 
Symbol 
ID4599950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp2251355 
End bp2252032 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID639776709 
Producttranscriptional regulator 
Protein accessionYP_923302 
Protein GI119716337 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.317917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGAC CGACACTCGC GGATCAGCCC GCCCAGCTCC CGGCCCGCGT GCGGCGCACC 
GAGGTGCTCT CGATGCTGCG CCAGGCCGAC CAGCCGCTGT CGGTCGCCGA GGTCGCGGAG 
GCGATGGGCC TGCACGTGAA CACCGCGCGC TTCCACCTCG ACGGCCTGGT CGAGGACGGC 
CTGGCCGAGC GGACCACGGA GCCGCGCGAG ACCCCCGGCC GGCCGCGGAT CCTCTACGCC 
TCCGACGGCC CCTCGCTGGG ACCCCGCAGC TACGAGCTGC TCGCGGAGAT GCTCACCGGC 
TTTGTCTCCT CGCTGCAGGA CACCGGCTCC GGGACCGTCG AGCTCGGCAA GGCGTGGGGA 
CGCCACCTCA TCGAGCGGTC GGCACCGTCC GAGCGCGTCG ACACCAGCGA GGCCGTGGTC 
CGCCTCGACC GGATGCTCGA CGCCATCGGA TTCCAGCCCG AGTCCGAGAC CACCGACGCC 
GGCGCGGAGG TGCGGCTGCA CCGCTGCCCG TTCCGCGAGG TCGCCGAGAA GCACACCGAC 
GTCGTGTGCG CGATCCACCT CGGGCTGATG CAGGGTGCGC TCGAGGAGAT CGACGCACCG 
GTGACTGCGA CGTCGCTCCA GCCGTTCGTG ACCCCGCACC TGTGCGTCGC CCGGCTGGAG 
CCACGAGCTT CGGCGTAG
 
Protein sequence
MTGPTLADQP AQLPARVRRT EVLSMLRQAD QPLSVAEVAE AMGLHVNTAR FHLDGLVEDG 
LAERTTEPRE TPGRPRILYA SDGPSLGPRS YELLAEMLTG FVSSLQDTGS GTVELGKAWG 
RHLIERSAPS ERVDTSEAVV RLDRMLDAIG FQPESETTDA GAEVRLHRCP FREVAEKHTD 
VVCAIHLGLM QGALEEIDAP VTATSLQPFV TPHLCVARLE PRASA