Gene Noca_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2078 
Symbol 
ID4595523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp2222271 
End bp2222915 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID639776681 
Productisochorismatase hydrolase 
Protein accessionYP_923274 
Protein GI119716309 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.58524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAACA GTGACACCGC CCTGGTCCTG ACGGACCCGC AGAACGACTT CCTGAGCGAG 
CACGGAGTGG CCTGGGAGTT GGTGGGGCAG AGCGTCCAGG AGAACGGCAC GATCCCGAAC 
ATCGAGCGCC TCCTGGAGAG CGCGACGACG GCGGGCGTCC CCGTCTTCGT CTCGCCCCAC 
TACTACTACC CGTACGACGG CGCCTGGCAG TTCGGCGGGA CGCTCGAGCA GAAGATGCAC 
GAGATCGGGA TGTTCGCCCG ACGTGGCCCC CTCGACCTCG ACGGCTTCGA GGGTTCGGGA 
GCGGACTGGC TGGACCAGTA CAAGCCGTAT CTCCAGGGCG ACGGCACCGT CGTCACCAGC 
CCGCACAAGG TCTACGGCCC GCAGAACAAC GACCTCGCAC TGCAGTTGCG CAAGCGCGGC 
ATCGGACGTG TGATCCTCGC GGGCATGTCA GCGAACCTCT GCGTCGAATC ACACCTGCGC 
GACCTGCTCG AGCGTGGTTT CGAGGTGACC GTCGTCGCCG ATGCGACCGC CGCGGCCCGG 
CACCCCGAGC TCGGCGACGG CTATGTGGCG GCGATGACCA ACTTCCGCTA CCTCGCCAGC 
GCGGTCGTCG ACACGGTCCA AGCCTCCAAG GAGCTCGCCG GCTGA
 
Protein sequence
MVNSDTALVL TDPQNDFLSE HGVAWELVGQ SVQENGTIPN IERLLESATT AGVPVFVSPH 
YYYPYDGAWQ FGGTLEQKMH EIGMFARRGP LDLDGFEGSG ADWLDQYKPY LQGDGTVVTS 
PHKVYGPQNN DLALQLRKRG IGRVILAGMS ANLCVESHLR DLLERGFEVT VVADATAAAR 
HPELGDGYVA AMTNFRYLAS AVVDTVQASK ELAG