Gene Noca_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2056 
Symbol 
ID4595810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp2200491 
End bp2201129 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID639776659 
Productcation efflux protein 
Protein accessionYP_923252 
Protein GI119716287 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0243028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCAC CCGAACCGGT CGAGCCGACC CGCCTCGATG CGCGGCAGCT GCGGCGCGCC 
GTGCTGGTGG TCGCCGGCCT GAACTTCTCC TACTTCTTCG TCGAGTTCAC GGTCGCGCTC 
TCAGCGGGGT CGGTGTCGCT GCTGGCCGAC AGCGTCGACT TCCTCGAGGA CACCTCGATC 
AACCTGTTGA TCTTCATCGC GCTCGGCTGG CCGCTGGCCC GGCGCGCCCT GGCCGGCAAG 
GCGATGGCGC TGATCATCCT CGGGCCGGCT TCGGTCGCGG CGTGGACGGC GATCCAGCGG 
TACAGCGACC CGGTCGCCCC GGAGGTGGTG CCGCTGGTGC TCGCCTCGCT CGGCGCCATC 
GTGGTCAACG GGACCAGCGC CTGGGTGCTG GTCAACGTCC GGCACTCGGG AGGCTCGCTG 
AGCCGCGCCG CGTTCCTCTC GGCCCGCAAC GACGTGCTGG TGAACGTCGC GATCATCGCG 
ATGGGCCTGG TCACCGCCTG GACGGGCTCG GGCTGGCCGG ACCTGGTCCT CGGCACGTTC 
ATCATCCTGC TGGCCGCGCA CGCCGCCTGG GAGGTCTGGG AGGTCAGCGA GGAGGAGCGG 
CTGGCCTCGA AGGCCCTGGC CGGGGAGGAG ATCGACTGA
 
Protein sequence
MTSPEPVEPT RLDARQLRRA VLVVAGLNFS YFFVEFTVAL SAGSVSLLAD SVDFLEDTSI 
NLLIFIALGW PLARRALAGK AMALIILGPA SVAAWTAIQR YSDPVAPEVV PLVLASLGAI 
VVNGTSAWVL VNVRHSGGSL SRAAFLSARN DVLVNVAIIA MGLVTAWTGS GWPDLVLGTF 
IILLAAHAAW EVWEVSEEER LASKALAGEE ID