Gene Noca_2011 details

Gene Information

• Locus tag: Noca_2011
• ID: 4598633
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 2152830
• End bp: 2154776
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639776615
• Product: GTP-binding protein, HSR1-related
• Protein accession: YP_923208
• Protein GI: 119716243
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0370] Fe2+ transport system protein B
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00437] ferrous iron transporter FeoB

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.606318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGC ACTGCGCGCC CGGGCCGGCC ACCAGCACCG ACACCGGCCG CGCCATGGTC 
GCGCTGGTCG GCGCGCCGAA CGCCGGCAAG TCGACGATCT TCAACGCGCT GACCGGGCTG 
CGGGTCAAGA CCGGCAACTA TCCCGGCGTC ACCGTGGGGC GCTCCCAGGG CACCTGCGCG 
CTGACCGACG GCACGGCGGT CGAGGTGGAG GACCTGCCCG GCACCTACAG CCTGGAGCCG 
ATCAGCATCG ACGAGCGGAT CGTGGTCGAC CTGCTGCACG GTCGGCTCGA CGGCGTCGGC 
GAGCCGGACG CGGTGCTGGT GGTCGCCGAC GCGACGACCC TGCGCAGCTC GCTGCGGCTG 
CTGGCCGGGG TGCTCGCGCT CGGCCGCCCG ACCGCGCTGG TGCTGACCAT GCACGACGAG 
CTGGTCGCCC GCGGTGGGCG GGTCGACCTG GACCGGCTGA CCCGGGCGCT CGGCGTGCCC 
GTGGTCGTCG CGGACGGCCG TCGGCGTGCC GGGGCCGCGG AGCTGGTCGA CCTGCTGCGC 
GACCGGCCGG CGTGGCCGGC GCCCGTCGTA CCGCCCCCGA CCGACACCGA CGAGTGCACC 
GCATGGATCA GCTCGGTGCT GACGACCGCG GCGTACCGCT CGGCCCAGGA GAGCGCGCTG 
ACCGCCCGGA TCGACCGGGT GCTGCTGCAC CCGGTGGCGG GCGTCGCGGT GTTCTTCGCG 
GTGATGTTCG GGTTCTTCCA GACGATCTTC GCGCTGGCCG CGCCCGCCCA GGACGCGATC 
GGCACCGGCA TCGCGGCGCT CGCGGCGACG GTGCGCGACA CCTTCGGCGA CTCCGCGCCC 
GTCCGGCTGG TGACCGACGG TCTGCTCGGC GGCGTGGGCG GCGTGCTGGT CTTCGTGCCG 
CAGATCGCGC TGCTGTTCGT GCTGATCGCC GCGCTCGAGC AGGTCGGCTA CCTCTCCCGG 
GCGGCGTTCC TGATGGACCG GGTGATGGCC CTGGCCGGCC TGGAGGGCCG GGCGTTCGTC 
GCGCTGCTGT CGTCGTTCGC GTGCGCGATC CCCGGCATCA TGGCCACCCG CACGATGCCC 
TCGGCGCGCG AGCGGTTGGC GACGATGCTC TCGGTGCCGC TGGTGACCTG CTCGGCGCGG 
CTGCCGGTCT ACACGCTGCT GATCTCGATG CTGATCCCGG CGCAGGCGAG CTGGTGGGGC 
GTGAGCGCCC GCGGCACCAC GATGTTCGGC CTCTACCTGC TGGGCGCGGT CTCGATGATG 
CTCGCCGCCC GGGTCGCGAC CCTCGTCGGC GGCGGCCGGC ACCCGGTGAT GCCGTTCACG 
ATGGAGATGC CGCCGTACCG GCTGCCCGCC CTGCGCTCGG TGGTCGTCGC GGTCTGGCTG 
CCGGTCAAGG GCTTCCTGCG CAAGATGGGC ACGGTCATCG TGGTCTCGAC GATCGTGCTC 
TGGGCGCTGC TGAACCTGCC GGTGCACTCG GCCGCCGAGC TGCGCGCGGA CGGCGTCGAC 
CCGGCCGACG GTACGGCGGT CGCGGCGTAC ACGATGGAGC ACAGCGTGGC GGCCGGGATC 
GGGCGTGCGG CGGCCCCGGT CTTCGACCCG CTCGGCTTGG ACTGGCGCAC GAACGTCGCG 
GTGATCTCCT CGCTCGCGGC GCGGGAGACG TTCGTCGCGA CGATGGGCCA GATCACCGCG 
GCCGGCGACC CGGACCAGCC GGCGCAGGCG CTGCGCGACA CCACCTTCGA CAGCGGTCCG 
AAGGCCGGGC AGCCCGTCTT CACCTCCGCG ACCCTGGCCG CGCTGCTGGT GTTCTTCGTC 
TACGCCCTGC AGTGCATGGC GACGATCGCC ACCCTGCGCC GGGAGACCGG CGGTTGGCAG 
TGGCCGCTGA CGGTGTTCGG GGCGTACTTC GCGCTCGCCT GGACGATGGC GCTGCTGGCC 
CGCACCGTGG TGGGGGCCTT CGCATGA 

 

Protein sequence

MSAHCAPGPA TSTDTGRAMV ALVGAPNAGK STIFNALTGL RVKTGNYPGV TVGRSQGTCA 
LTDGTAVEVE DLPGTYSLEP ISIDERIVVD LLHGRLDGVG EPDAVLVVAD ATTLRSSLRL 
LAGVLALGRP TALVLTMHDE LVARGGRVDL DRLTRALGVP VVVADGRRRA GAAELVDLLR 
DRPAWPAPVV PPPTDTDECT AWISSVLTTA AYRSAQESAL TARIDRVLLH PVAGVAVFFA 
VMFGFFQTIF ALAAPAQDAI GTGIAALAAT VRDTFGDSAP VRLVTDGLLG GVGGVLVFVP 
QIALLFVLIA ALEQVGYLSR AAFLMDRVMA LAGLEGRAFV ALLSSFACAI PGIMATRTMP 
SARERLATML SVPLVTCSAR LPVYTLLISM LIPAQASWWG VSARGTTMFG LYLLGAVSMM 
LAARVATLVG GGRHPVMPFT MEMPPYRLPA LRSVVVAVWL PVKGFLRKMG TVIVVSTIVL 
WALLNLPVHS AAELRADGVD PADGTAVAAY TMEHSVAAGI GRAAAPVFDP LGLDWRTNVA 
VISSLAARET FVATMGQITA AGDPDQPAQA LRDTTFDSGP KAGQPVFTSA TLAALLVFFV 
YALQCMATIA TLRRETGGWQ WPLTVFGAYF ALAWTMALLA RTVVGAFA