| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1977 |
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| Symbol | |
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| ID | 4598289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2105763 |
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| End bp | 2108981 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639776577 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_923174 |
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| Protein GI | 119716209 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.732577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTCG CCGGGTTGTA CCGGGACATC GTCGAGACGT CACCGGACGG CTTCTGGGTC
TTCGACCTCG ACGGTAGGAC CCTCTACGGG AACCCGGCAC TGCGGGCGTT CTTCGGGGTG
GGCCCGGAGG AGCTGCTCCA GCTCACCGTC TTCGACTCGC TCGACGAGGT GGGCAAGGAG
CAGTTCGCCG ACCACCTCGA CCAGCTCCGC GCCGGGAAGG TGAACCCGCA CGACGTCGAG
TGCAGGTTCG TGCGGCGCGA CGGCGGCACG ATGTGGGTCA CTCTCAGCGA GAGCCTCGTG
CCCGGGCCCG ACGGCTCGGT GGCGGTCCTG CACCGGCTCA GCGACTACAG CGACCGGCGG
CGCACGGTCG ACGACCTCAC CAGCAGCCGC CGCCGGCTCG CCGAGGCACA GCGGATCGCC
CGGATCGGCA GCTGGGAGTG GGACCTCGCG CCGGACGAGA TCTGGGGCTC CGAGGAGCTG
TGCGCACTGT ACGGCCTGGA TCCCGAGCTG TTCCCGGCGT CGTACGCCGA CTTCCTCGAG
ATCGTGCACG AGGACGACCG CGGTGCGGTC GACGAGGCCG TCCGCGGGGC ACTCGAGGCA
CCCTCCGACT TCGTCTTCGT GGCCCGGGTC CGCACCGCCG ACGGGGCCTG GGTGTGGACC
CGCGGCCGCG GCGTGTCGTT GGCGGACGCC GACGGCCGGG TCGCCTCCAT GTACGGCACC
CACCAGGACA TCACCGAGAC GAAGCTCGCC GAGATCGCGC TGGAGGACCA GGTCCGGCAG
AACGTCCTCC TGCAGGCGAT GGCGACGGCC GCCAACGAGG CGGCCACCCT CGAGGACGTC
CTCCTGCAGG CCCGCCACCT CGTGCTGTTG CACGACGACT GGGTGCGTGG GCGCGCGTTC
GTGCCGACCG AGGATCGCCG TGCGGTCGTC GCGCTGCACG TCACCGGCGA GGACCAGGCC
GCCGACCTCG CGGCACCCGC GCAGGCGGCC GCCGACCTCG CTCTTGCCAA CCGAGCCTTC
CTGGAGCGCG GCTCGGTGTG GGACGAGGAC CGGCTGACGA TCGCGTTCAC CGTCGCGCAC
GGCGACGAGG TCGTCGCCGT GCTGACGATC ACCTCCGCCC CGCCGCTGCA CCGGTTCGAG
CTGATCGAGG CGATGGTGGA GCAGGTCGGG GTGCAGCTCG GCCGGGTCGC CGAGCGCGAG
CGCGCGCAGC GCGAGCTCGC CGACGCGCGG GACGTGGCCA TGGCCGCGTC CCGCCAGAAG
TCGGAGTTCC TGGCCACCAT GAGCCACGAG ATCCGCACGC CGCTCAACGG CGTGATCGGG
CTCAACGACC TGCTCCTGCG CACTCCGCTC GACCCGGACC AGCTGCGACT CGCCTCCGGC
GTCCAGGTCG CCAGCCGGGC GCTGCTCGGC GTCATCAACG ACATCCTCGA CTTCTCCAAG
ATCGAGGCGG GCAAGCTCGA GCTGGAGCGC CTGGACTTCG AGGTCCGCGG CGTGTTCGAC
CAGGTTGCGA GCCTCCTCGG CGAGGCCGCG CGGGCCAAGG GGCTCGAGCT GATCGTCTCC
TGCCACTCCG AGGTGCCGGA GGTGCTCCGC GGCGACCCGA CCCGGCTCGC GCAGGTGATC
ACGAACCTCG GCTCGAACGC GGTGAAGTTC ACCGAGGAGG GCGAGGTCTT CATCCGGGCG
ACCGCGTCCC CGGGGCCGGC TGGCCGGACC CGGCTGCACG TCAGCGTCAC CGACACGGGC
GTCGGGGTGC CGGCGAACGA CGTCGGCGAG CTGTTCGAGG CCTTCATCCA GGCCGACGCG
TCCACCACCC GCCGGTTCGG CGGGACCGGC CTCGGCCTGG CGATCTCCCG GGAGATCGTC
CAGGCACTGG GCGGCGAGAT CGGGATGGAG CCCAACCCCG GCGGCGGCAG CGTCTTCTGG
TTCACCGCGG ACCTCGAGTC CCCGGGCGGG CCCAGGGTGG ACGCCGACGA CGAGTACGCC
CGCAGCTGGC TGAGCGGGCG GCGGGTGCTC GTCGTGGACG ACAACCAGCA CAACCGGCTG
ATCCTGGAGG AGCAGCTCGG GTGGTGGCGG ATCCGGGTCG CGGCCGCCTC CTCGGCCGAC
GAGGCCGAGC AGGCCGTCGC CGCGGCACAC GCCGCCGGTG ACCCGTTCGA GGCCGTGCTG
CTGGACCTCT CGATGCCCGG ACGCGACGGG CTCGACCTGG CGCGATCGCT GCGCGCGGAG
CCGTCGTACG ACCTGCGCGT GATCATGCTG GCCTCGGGGT CCACGCCGTC GGCGTGGGAC
CTGCGGACCG CCGGCATCGT CGCCTGCCTG ACCAAGCCGG TGCTCGGGGC CGAGGTACGA
GCCGCGCTGT TGCGGCACCT GGCCGGGGTG GAGCCGCGGC CCGAGCCCGA GCTGCCCGTC
GTCGGGCCGG ACCCGGGCCC GCGGGCCCGG GTCCTGGTGG TGGAGGACAA CGAGGTCAAC
CAGCTCGTCG CGGTCGGCCT GCTCGAGGCC CTCGGCTACC GCGCGCGGGT CGCCGAGGAC
GGGGCAGCGG CGCTGACGGC GCTCGCCGAG GAGCACTTCG ACCTGGTGCT GATGGACGTG
CAGATGCCAC GGATGGACGG GTACGCCGCC ACCCGGGCGA TCCGGGCGGG CGAGTCGGAC
GGGCGGTCCC GCCTGCCGGT GGTCGCCATG ACCGCCGCCG CGGTGGAGGG CGAGCGGGAG
CGGTGCGTGG CGGCCGGGAT GGACGACTTC TTGACCAAGC CCGTCGACGC GGGAGCACTC
GCCGCCGTGC TCGACCAGTG GGTCGGCACC CGATCCGGGT CCGTACCGCG TAGCGTGCGG
GTCGTGAGCG AGGAGCAGAA CCGCGGACCC GACGACGCGC TCGAGGGGCT GACCCTCGAC
CGGCTCGACG AGCTGCGGGA CCTCGACCCC GACAACACGG CCTACCTGGA CCGGGCGATC
GGCAACTTCG TCGCCAACAC GCCGGGGACG CTCGAGTCGA TCCGGGCGGC CGTGGCCGCC
GACGACGCGG CGACGCTCAA GCAGGTCGTG CACAAGCTCG CGGGTGGCGC CTTGAACCTC
GGCGTCACCC GGGCCGGGCG CACCGCGCAG CAGATCGAGC TGATCGCCGA CACCGGCACG
ACCGACGGGG CCGCGGAGCT GGTCGAGCAG CTGGCCGAGG AGCTCGCGGA CGGCCGCGCC
GCCCTGCTGG CCTACCAGGC GACGTACTCG GCCACCTGA
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| Protein sequence | MELAGLYRDI VETSPDGFWV FDLDGRTLYG NPALRAFFGV GPEELLQLTV FDSLDEVGKE
QFADHLDQLR AGKVNPHDVE CRFVRRDGGT MWVTLSESLV PGPDGSVAVL HRLSDYSDRR
RTVDDLTSSR RRLAEAQRIA RIGSWEWDLA PDEIWGSEEL CALYGLDPEL FPASYADFLE
IVHEDDRGAV DEAVRGALEA PSDFVFVARV RTADGAWVWT RGRGVSLADA DGRVASMYGT
HQDITETKLA EIALEDQVRQ NVLLQAMATA ANEAATLEDV LLQARHLVLL HDDWVRGRAF
VPTEDRRAVV ALHVTGEDQA ADLAAPAQAA ADLALANRAF LERGSVWDED RLTIAFTVAH
GDEVVAVLTI TSAPPLHRFE LIEAMVEQVG VQLGRVAERE RAQRELADAR DVAMAASRQK
SEFLATMSHE IRTPLNGVIG LNDLLLRTPL DPDQLRLASG VQVASRALLG VINDILDFSK
IEAGKLELER LDFEVRGVFD QVASLLGEAA RAKGLELIVS CHSEVPEVLR GDPTRLAQVI
TNLGSNAVKF TEEGEVFIRA TASPGPAGRT RLHVSVTDTG VGVPANDVGE LFEAFIQADA
STTRRFGGTG LGLAISREIV QALGGEIGME PNPGGGSVFW FTADLESPGG PRVDADDEYA
RSWLSGRRVL VVDDNQHNRL ILEEQLGWWR IRVAAASSAD EAEQAVAAAH AAGDPFEAVL
LDLSMPGRDG LDLARSLRAE PSYDLRVIML ASGSTPSAWD LRTAGIVACL TKPVLGAEVR
AALLRHLAGV EPRPEPELPV VGPDPGPRAR VLVVEDNEVN QLVAVGLLEA LGYRARVAED
GAAALTALAE EHFDLVLMDV QMPRMDGYAA TRAIRAGESD GRSRLPVVAM TAAAVEGERE
RCVAAGMDDF LTKPVDAGAL AAVLDQWVGT RSGSVPRSVR VVSEEQNRGP DDALEGLTLD
RLDELRDLDP DNTAYLDRAI GNFVANTPGT LESIRAAVAA DDAATLKQVV HKLAGGALNL
GVTRAGRTAQ QIELIADTGT TDGAAELVEQ LAEELADGRA ALLAYQATYS AT
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