| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1966 |
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| Symbol | |
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| ID | 4599873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2096111 |
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| End bp | 2097322 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639776566 |
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| Product | phage integrase family protein |
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| Protein accession | YP_923163 |
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| Protein GI | 119716198 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00610288 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACGA AGATGAAGGA CGGCATCACG CAGCGCGGCC GCGGGTGGAC CTACGTGGTT
CGCGAGCGTG ATCCCGAAAC AGGAAGGTCT CGGCAGCGGT GGGTCTCGGG TTTCACCACG
CGCGCAGAAG CCAAGGCTGC GCGGGACGCC GCTCGGCATG CGCTACACAG CGGAACCTAC
GTCGCCCCGC AGGACATCAC GGTCGCCGAG TGGCTCGACC GATGGATGGA CGGGCACGAG
GTGACGCTGA AACCCTCCAC CGCAAAGACC TACAGGGACA AGATCCGGCT CTACCTCAAG
CCGAAGCTTG GATCCGCACG CCTCCAGAGC CTCTCCCCGA GCGGCTTGAC CGTGGTTTGG
CGAGACCTCC AAGCGTCAGG CGGACGAAGT GGGGCACCGC TCTCGCGTCG CACCGTCGAG
TTCGCTCGCG CCGTCCTGCA TGCAGCGATG CAGGACGCGG TGGTCGAGCG CATCATCCAG
GTGAACCCCG TCGACGGCTC AAAGATGGCC AAGCGCGACG GCAAGCCGAA GCACACGACC
TGGACAGCGG CACAGGTGGC CTCCTTCCTC ACAGCGACCA CAAGCGACCG GTGGCACCCG
ATGTGGGCTG TGTTCGCCTC CACAGGTATG CGGCGAGGCG AGGTCGCCGG GCTGCGATGG
AGCGATTCTC ACGGCCCCAT CGTCGATCTG GATGGCGGGA CGATCCGGGT CGAGGTGTCG
ACGACGCAAC TCGACAACCG AAGGGTGACG ACAACGCCCA AGAATCATGA GCGCCGGACC
ATCGCCATCG ACCCGGACCT CGTCACCGTC CTTCGGACCT GGAAGGCAAC ACAGGCCGCC
GAACGCCTGG CCTTCGGCCC AGGCTATGCC GACGCGGAGG GCATCGTCTT CACATGGGAG
GACGGGCGAC CCGTCATGCC CGACTACATC AGCAAGACCT TTCTGACGGC CCAGACCAAG
CTCAAGGAAC TAGCGGCAGG ACCGGGTGAC GATGCCCCGG CCACGATCGT GCCGTTGCCG
AGACTCGTCC TGCACGGCCT CCGTCACACC CACGCCACCA TCCTGCTGCG CTCGGGCGTC
CCGGTTCACG TCGTCGCTAG GCGGCTGGGC CACAAGGACC CCTCGGTGAC GCTGGATACC
TACGCCGACG TCATCCCGGA CGACGATTCG AGCGCCGTCG ACGTGTTCTG GAACGCCGTA
TGGGGGGCAT AG
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| Protein sequence | MATKMKDGIT QRGRGWTYVV RERDPETGRS RQRWVSGFTT RAEAKAARDA ARHALHSGTY
VAPQDITVAE WLDRWMDGHE VTLKPSTAKT YRDKIRLYLK PKLGSARLQS LSPSGLTVVW
RDLQASGGRS GAPLSRRTVE FARAVLHAAM QDAVVERIIQ VNPVDGSKMA KRDGKPKHTT
WTAAQVASFL TATTSDRWHP MWAVFASTGM RRGEVAGLRW SDSHGPIVDL DGGTIRVEVS
TTQLDNRRVT TTPKNHERRT IAIDPDLVTV LRTWKATQAA ERLAFGPGYA DAEGIVFTWE
DGRPVMPDYI SKTFLTAQTK LKELAAGPGD DAPATIVPLP RLVLHGLRHT HATILLRSGV
PVHVVARRLG HKDPSVTLDT YADVIPDDDS SAVDVFWNAV WGA
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