Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1960 |
Symbol | |
ID | 4599866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2090523 |
End bp | 2091050 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 639776559 |
Product | cytochrome C biogenesis protein |
Protein accession | YP_923157 |
Protein GI | 119716192 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0286678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCCCG CACGCCCGGC GCGCCCGTCG GGCGGCCGTC TGCGCCTGGC CCTCGCGGCC CTCGTCCTGA TGGCCACCGC CGGCGCCCTG GTGTGGGGCG CCGCGACCGG CCGGCCACCG ACCGACGAGG AGCGCGCCAC GGCGATCGCC GCGGGGCTGC GGTGCCCGGT CTGCACGGAC CTGTCGGCCG CCGACTCCTC GGCACCACTC GCGCGGCAGA TGCGGACCGA GATCCGGCAG CAGGTGGCGG CCGGGGTCTC CGACGAGGAG ATCCGTCGCG GCTTCGTCGA GGCCTACGGG CCGTCGGTGC TCCTGACCCC GCCCGCGGAC GGCATCGGCC GGGTCGCGCA CCTCCTGCCC GTGCTCGTCC TGGCGGCCGC GGCGGCGGGT GGCGCGACCG TCCTCGTGAG GGGTCGGCGC TCCGTGAGCC GGACCGGGCT CGGCCTCGCC GGGCCGGAGC CCGGCTCACC GACCGACCGG GCCCTGGTCG ACCGCGCGCT GGCCGACCTG CTGAAGGAGG AGTCGTGA
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Protein sequence | MSPARPARPS GGRLRLALAA LVLMATAGAL VWGAATGRPP TDEERATAIA AGLRCPVCTD LSAADSSAPL ARQMRTEIRQ QVAAGVSDEE IRRGFVEAYG PSVLLTPPAD GIGRVAHLLP VLVLAAAAAG GATVLVRGRR SVSRTGLGLA GPEPGSPTDR ALVDRALADL LKEES
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