| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1954 |
|---|
| Symbol | |
|---|
| ID | 4599860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2085206 |
|---|
| End bp | 2086603 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639776553 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_923151 |
|---|
| Protein GI | 119716186 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0503014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAGC AGGAAGACCC TCACCACGTA CCACCACCCG ATCCTCGGGG CCGCGGTCGC
GGCCCGCGAC GCTGGCTCGC CACCGTGGGC ATCCTCGCCC TCGGTGGGAT GGTGGCCCTG
GCCTACCAGG CAACGGCGGG TCCGCCGGCG GCGAAGCCGG CGACCGTCCA GAACCCCCCG
TCCGCCGGCG ACAACGCGCA GGCGATGGTC AAGGAGGGTC GACACACCTT CCGCTACGAC
ACGTTCGGGG ACCAGGCGTT CTGGGGCGGC ACGCTCCAGC TCCACGACGC GATCGCGGGG
GAGGACAACG GCGGCGTCGG TGGCGGCGTC AGCCCCAAGA CGGCGCTGGC CGTCGGGCTC
AAGGTCGACG TCAAGCGGCT GCCCGCCAGC GTCAAGAACG CACTCGCGAA CGGCAAGGTG
AACCTCGACG ACCCGGCGGT CACCCTGGCC CTGTTGAAGC TCAACTCGGT GGTCGGCGTG
AGGGGGTTCT TCAACTCCGA CGGCACCCTG CGGACCGTCG GCATCGAGTG CGCGCTGTGC
CACTCGACGG TCGACGACTC CTTCGCACCG GGCATCGGGA ACCGGCTCGA CGGCTGGGCC
AACCGGGACC TGAACGTCGG GGCGATCGTG TCCCTCGCGC CGAACCTGCA GCCGATCGCC
GATCTGCTGC ACACCGACGT CGACACGGTC AAGCAGGTCC TGGCCGCGTG GGGTCCGGGC
CGGTTCGACG CGCAGCTGTT CCTCGACGGG AAGGCCTTCC GTCCGGACGG TACGACGGCG
GCCACGGTGC TGCCGCCCGC GTTCGGGCTG CAGGGTGTCA ACCAGCACAC CTCGACCGGG
TGGGGCTCGG TGACGTACTG GAACGCCTTC GTGGCGAACC TGGAGATGCA CGGTCAGGGC
AACTTCTACG ACCCGCGTCT CGACAACGCC GACCAGTTCC CGATCGCGGC GGAGAACGGC
TTCGGCCACG TGCGGTCGAA GGTCGACAAG ATCTCGTCGA AGCTGCCGGC GCTCGCCGCC
TACCAGCTGT CGCTGACCGC GCCGACGCCG CCGAAGGGCA GCTTCGACCC GAAGGCGGCG
GCCCGCGGTG AGTCGCTGTT CATGGGACAG GCCCAGTGCT CGACCTGCCA CGTCCCGCCG
ACGTTCACCG AGCCGGGGTT CAACATGCAC ACCGGTGAGG AGATCGGGAT CGACAACTTC
CAGGCCGATC GCTCGCCGAC GCACATGTAC CGCACCAGCC CGCTCAAGGG TCTGTGGAGC
CACCAGAAGG GCGGCTTCTA CCACGATGGT CGGTTCCCGG AGCTGGTCGA CGTCGTCCAG
CACTACAACG ACACCTTCGG CCTGGGCCTC ACCGAGGCCC AGCAGGGCGA CCTCGTCCAG
TACCTGAAGT CGCTCTGA
|
|---|
| Protein sequence | MVKQEDPHHV PPPDPRGRGR GPRRWLATVG ILALGGMVAL AYQATAGPPA AKPATVQNPP
SAGDNAQAMV KEGRHTFRYD TFGDQAFWGG TLQLHDAIAG EDNGGVGGGV SPKTALAVGL
KVDVKRLPAS VKNALANGKV NLDDPAVTLA LLKLNSVVGV RGFFNSDGTL RTVGIECALC
HSTVDDSFAP GIGNRLDGWA NRDLNVGAIV SLAPNLQPIA DLLHTDVDTV KQVLAAWGPG
RFDAQLFLDG KAFRPDGTTA ATVLPPAFGL QGVNQHTSTG WGSVTYWNAF VANLEMHGQG
NFYDPRLDNA DQFPIAAENG FGHVRSKVDK ISSKLPALAA YQLSLTAPTP PKGSFDPKAA
ARGESLFMGQ AQCSTCHVPP TFTEPGFNMH TGEEIGIDNF QADRSPTHMY RTSPLKGLWS
HQKGGFYHDG RFPELVDVVQ HYNDTFGLGL TEAQQGDLVQ YLKSL
|
|---|
| |